Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1806

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,079,026	+		Psyr_1805	0.32	+2.9
2,079,026	+		Psyr_1805	0.32	-2.2
2,079,026	+		Psyr_1805	0.32	-2.8
2,079,026	+		Psyr_1805	0.32	+2.9
2,079,026	+		Psyr_1805	0.32	+3.2
2,079,027	-		Psyr_1805	0.32	+0.9
2,079,027	-		Psyr_1805	0.32	+1.9
2,079,027	-		Psyr_1805	0.32	-1.9
2,079,027	-		Psyr_1805	0.32	+2.4
2,079,096	+		Psyr_1805	0.38	+3.7
2,079,104	+		Psyr_1805	0.38	-2.0
2,079,105	-		Psyr_1805	0.38	+3.0
2,079,105	-		Psyr_1805	0.38	-3.0
2,079,158	+		Psyr_1805	0.43	+1.4
2,079,159	-		Psyr_1805	0.43	+4.2
2,079,159	-		Psyr_1805	0.43	-1.3
2,079,171	-		Psyr_1805	0.44	+3.9
2,079,224	+		Psyr_1805	0.48	+2.7
2,079,224	+		Psyr_1805	0.48	+2.7
2,079,224	+		Psyr_1805	0.48	+1.3
2,079,224	+		Psyr_1805	0.48	-0.8
2,079,224	+		Psyr_1805	0.48	-0.5
2,079,225	-		Psyr_1805	0.48	-1.1
2,079,225	-		Psyr_1805	0.48	-2.0
2,079,225	-		Psyr_1805	0.48	-1.4
2,079,225	-		Psyr_1805	0.48	+0.6
2,079,384	-		Psyr_1805	0.60	-1.4
2,079,404	-		Psyr_1805	0.62	-2.1
2,079,404	-		Psyr_1805	0.62	+3.2
2,079,504	-		Psyr_1805	0.69	-0.3
2,079,588	-		Psyr_1805	0.76	+1.9
2,079,651	-		Psyr_1805	0.81	+0.9
2,079,651	-		Psyr_1805	0.81	-1.5
2,079,707	+		Psyr_1805	0.85	+0.9
2,079,707	+		Psyr_1805	0.85	-1.7
2,079,707	+		Psyr_1805	0.85	+3.6
2,079,708	-		Psyr_1805	0.85	+3.2
2,079,708	-		Psyr_1805	0.85	+4.2
2,079,708	-		Psyr_1805	0.85	+2.4
2,079,722	+		Psyr_1805	0.86	-3.0
2,079,722	+		Psyr_1805	0.86	+3.2
2,079,723	-		Psyr_1805	0.86	-0.1
2,079,723	-		Psyr_1805	0.86	+2.2
2,079,723	-		Psyr_1805	0.86	+4.3
2,079,723	-		Psyr_1805	0.86	-1.1
2,079,812	+				-3.2
2,079,812	+				-0.4
2,079,813	-				-0.3
2,079,813	-				+3.9
2,079,813	-				-1.4
2,079,888	+				+1.4
2,079,888	+				+3.4
2,079,888	+				-1.2
2,079,888	+				+1.1
2,079,888	+				-1.0
2,079,888	+				-2.5
2,079,888	+				-0.4
2,079,888	+				-1.1
2,079,888	+				+2.2
2,079,888	+				+0.7
2,079,889	-				-0.4
2,079,889	-				+2.4
2,079,889	-				-0.0
2,079,889	-				+1.0
2,079,889	-				-0.7
2,079,889	-				+3.9
2,079,889	-				-2.9
2,079,889	-				+1.9
2,079,889	-				+1.9
2,079,889	-				+1.3
2,079,889	-				-0.6
2,079,889	-				+1.4
2,079,889	-				+1.9
2,079,889	-				+4.1
2,079,958	+		Psyr_1806	0.10	-0.4
2,079,958	+		Psyr_1806	0.10	+2.7
2,079,958	+		Psyr_1806	0.10	-1.5
2,079,958	+		Psyr_1806	0.10	-3.1
2,079,959	-		Psyr_1806	0.10	-1.7
2,080,459	+				-1.3
2,080,462	-				+1.4
2,080,462	-				-2.3
2,080,520	+				-0.8
2,080,521	-				-0.1
2,080,552	+				+0.9
2,080,553	-				+0.5
2,080,573	+				+3.3
2,080,573	+				-0.0
2,080,573	+				+0.1
2,080,573	+				-1.9
2,080,573	+				+3.2
2,080,573	+				+0.8
2,080,573	+				+2.9
2,080,573	+				-2.0
2,080,574	-				+2.7
2,080,574	-				-0.8
2,080,574	-				+1.3
2,080,574	-				+0.1
2,080,574	-				-2.3
2,080,574	-				-1.1
2,080,574	-				-2.0
2,080,574	-				+0.5
2,080,574	-				+2.8
2,080,574	-				+1.4
2,080,574	-				+3.2
2,080,574	-				-0.6
2,080,574	-				-1.9
2,080,577	+				-0.1
2,080,577	+				-0.1
2,080,577	+				-1.0
2,080,577	+				+0.8
2,080,577	+				-1.9
2,080,577	+				-0.4
2,080,577	+				-0.5
2,080,577	+				-0.1
2,080,577	+				+3.6
2,080,577	+				-0.7
2,080,577	+				+0.9
2,080,577	+				-1.6
2,080,577	+				+1.4
2,080,577	+				+2.9
2,080,577	+				-3.6
2,080,577	+				+1.4
2,080,577	+				+1.9
2,080,577	+				-3.6
2,080,578	-				-2.0
2,080,578	-				+2.4
2,080,578	-				-1.9
2,080,578	-				+4.9
2,080,578	-				-2.6
2,080,578	-				+3.2
2,080,578	-				+0.7
2,080,578	-				-0.3
2,080,578	-				+0.1
2,080,578	-				+2.2
2,080,578	-				+1.6
2,080,578	-				-1.3
2,080,578	-				-1.4
2,080,578	-				-0.5
2,080,578	-				+3.8
2,080,578	-				+3.0
2,080,578	-				+2.4
2,080,578	-				+1.5
2,080,578	-				+2.9
2,080,578	-				+3.3
2,080,578	-				-0.7
2,080,579	+				+0.4
2,080,579	+				-0.4
2,080,579	+				-0.1
2,080,580	-				+3.3
2,080,580	-				-1.0
2,080,580	-				-1.4
2,080,580	-				-2.8
2,080,580	-				+2.2
2,080,580	-				-2.2
2,080,598	-				+2.4
2,080,611	+				-0.0
2,080,675	-				+2.2
2,080,859	+		Psyr_1807	0.24	-1.5
2,080,860	-		Psyr_1807	0.24	-0.1
2,080,860	-		Psyr_1807	0.24	-0.1
2,080,860	-		Psyr_1807	0.24	-3.4
2,080,860	-		Psyr_1807	0.24	-0.4
2,080,860	-		Psyr_1807	0.24	+1.0
2,081,162	-		Psyr_1807	0.54	+0.7