Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1777

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,023,892	-		Psyr_1776	0.68	+2.5
2,023,892	-		Psyr_1776	0.68	-1.5
2,023,939	+		Psyr_1776	0.70	-0.1
2,023,939	+		Psyr_1776	0.70	+1.4
2,023,940	-		Psyr_1776	0.71	-3.3
2,023,940	-		Psyr_1776	0.71	+1.9
2,023,940	-		Psyr_1776	0.71	-0.6
2,023,940	-		Psyr_1776	0.71	+0.1
2,024,074	-		Psyr_1776	0.79	+0.9
2,024,147	-		Psyr_1776	0.83	+0.8
2,024,175	+		Psyr_1776	0.85	+3.3
2,024,176	-		Psyr_1776	0.85	-1.8
2,024,242	+		Psyr_1776	0.89	+3.0
2,024,242	+		Psyr_1776	0.89	+1.5
2,024,242	+		Psyr_1776	0.89	+3.7
2,024,305	+				-0.8
2,024,306	-				+1.9
2,024,415	-				+2.9
2,024,439	+				-0.5
2,024,551	+				+1.9
2,024,573	+				+1.5
2,024,574	-				-0.5
2,024,620	+				+2.7
2,024,620	+				+0.9
2,024,620	+				-0.1
2,024,620	+				-0.6
2,024,620	+				+4.3
2,024,620	+				+1.5
2,024,621	-				+2.5
2,024,836	+		Psyr_1777	0.10	+1.9
2,024,899	+		Psyr_1777	0.20	+4.5
2,024,899	+		Psyr_1777	0.20	-3.8
2,025,126	-		Psyr_1777	0.58	-1.3
2,025,127	+		Psyr_1777	0.58	-0.8
2,025,128	-				-0.1
2,025,244	+		Psyr_1777	0.77	+4.0
2,025,244	+		Psyr_1777	0.77	+1.5
2,025,244	+		Psyr_1777	0.77	+4.3
2,025,244	+		Psyr_1777	0.77	+3.0
2,025,247	+		Psyr_1777	0.78	+0.5
2,025,247	+		Psyr_1777	0.78	+1.9
2,025,247	+		Psyr_1777	0.78	+2.7
2,025,247	+		Psyr_1777	0.78	+3.2
2,025,248	-		Psyr_1777	0.78	-0.1
2,025,250	+		Psyr_1777	0.78	+4.5
2,025,251	-		Psyr_1777	0.78	-4.6
2,025,251	-		Psyr_1777	0.78	-4.0
2,025,251	-		Psyr_1777	0.78	-3.7
2,025,251	-		Psyr_1777	0.78	+3.0
2,025,425	-				+2.2
2,025,425	-				+1.5
2,025,486	+				+1.9
2,025,552	+				+4.2
2,025,777	-		Psyr_1778	0.10	-0.5
2,026,132	+		Psyr_1778	0.22	-1.4
2,026,133	-		Psyr_1778	0.22	-2.1
2,026,133	-		Psyr_1778	0.22	-2.1