Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1762

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,002,916	+				-3.2
2,002,917	-				+2.2
2,002,940	+				-0.2
2,002,940	+				+0.4
2,002,941	-				-2.2
2,002,969	+				+1.4
2,002,969	+				-1.2
2,002,969	+				-2.6
2,002,970	-				-2.1
2,003,036	+				-1.4
2,003,036	+				-0.6
2,003,037	-				-2.5
2,003,291	-		Psyr_1761	0.34	+3.3
2,003,291	-		Psyr_1761	0.34	-1.7
2,003,305	+		Psyr_1761	0.36	+2.8
2,003,305	+		Psyr_1761	0.36	-1.0
2,003,305	+		Psyr_1761	0.36	+3.2
2,003,305	+		Psyr_1761	0.36	+1.8
2,003,449	+		Psyr_1761	0.54	+3.4
2,003,449	+		Psyr_1761	0.54	+2.2
2,003,449	+		Psyr_1761	0.54	+2.4
2,003,450	-		Psyr_1761	0.54	-4.4
2,003,450	-		Psyr_1761	0.54	-1.0
2,003,754	+				+2.7
2,003,755	-				-1.7
2,003,763	+				-1.0
2,003,763	+				+3.3
2,003,763	+				-1.2
2,003,763	+				-1.3
2,003,763	+				-4.8
2,003,763	+				+2.2
2,003,763	+				-0.5
2,003,763	+				+1.8
2,003,763	+				+3.4
2,003,763	+				+1.5
2,003,763	+				+3.5
2,003,763	+				+3.3
2,003,763	+				+0.8
2,003,763	+				-2.2
2,003,763	+				+0.8
2,003,763	+				+0.8
2,003,763	+				+3.2
2,003,763	+				+1.8
2,003,764	-				-1.5
2,003,764	-				+0.8
2,003,764	-				+0.1
2,003,764	-				+0.8
2,003,764	-				-0.3
2,003,764	-				+3.3
2,003,767	+				+3.0
2,003,767	+				-2.3
2,003,767	+				+1.5
2,003,767	+				-1.7
2,003,767	+				-0.5
2,003,767	+				-1.8
2,003,767	+				-2.2
2,003,767	+				+1.4
2,003,767	+				+3.8
2,003,767	+				-0.4
2,003,767	+				+2.7
2,003,767	+				-2.1
2,003,767	+				-2.5
2,003,767	+				-0.9
2,003,767	+				+4.0
2,003,767	+				+1.8
2,003,767	+				+1.8
2,003,767	+				-3.0
2,003,767	+				-1.9
2,003,767	+				-2.7
2,003,767	+				-1.6
2,003,767	+				-0.8
2,003,767	+				+2.8
2,003,767	+				-0.8
2,003,768	-				-3.2
2,003,768	-				-0.3
2,003,768	-				+1.8
2,003,768	-				+0.8
2,003,768	-				-1.3
2,003,768	-				+2.7
2,003,768	-				-1.7
2,003,768	-				-1.3
2,003,768	-				+1.8
2,003,768	-				+0.4
2,003,768	-				+1.8
2,003,768	-				-1.0
2,003,768	-				-2.8
2,003,768	-				-3.0
2,003,768	-				+2.2
2,003,768	-				+1.4
2,003,768	-				+3.0
2,003,768	-				+2.2
2,003,768	-				-2.5
2,003,768	-				-1.7
2,003,768	-				+3.4
2,003,802	+				-4.2
2,003,844	+				+0.5
2,003,845	-				-1.7
2,003,845	-				-0.3
2,003,845	-				-0.1
2,003,863	-				-3.3
2,004,103	+		Psyr_1762	0.28	-0.7
2,004,103	+		Psyr_1762	0.28	+1.9
2,004,103	+		Psyr_1762	0.28	+0.9
2,004,103	+		Psyr_1762	0.28	+0.9
2,004,103	+		Psyr_1762	0.28	-0.1
2,004,103	+		Psyr_1762	0.28	-0.1
2,004,104	-		Psyr_1762	0.28	-1.3
2,004,104	-		Psyr_1762	0.28	-0.1
2,004,104	-		Psyr_1762	0.28	-0.1
2,004,104	-		Psyr_1762	0.28	-1.1
2,004,190	+		Psyr_1762	0.40	-0.1
2,004,313	+		Psyr_1762	0.56	-1.5
2,004,314	-		Psyr_1762	0.56	-3.5
2,004,322	+		Psyr_1762	0.57	+0.9
2,004,322	+		Psyr_1762	0.57	-0.1
2,004,322	+		Psyr_1762	0.57	-4.1
2,004,322	+		Psyr_1762	0.57	-2.5
2,004,322	+		Psyr_1762	0.57	+0.9
2,004,322	+		Psyr_1762	0.57	-5.8
2,004,322	+		Psyr_1762	0.57	-3.2
2,004,323	-		Psyr_1762	0.57	-2.3
2,004,323	-		Psyr_1762	0.57	-0.1
2,004,323	-		Psyr_1762	0.57	-2.7
2,004,522	+		Psyr_1762	0.83	+0.9
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	+2.4
2,004,522	+		Psyr_1762	0.83	-4.7
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	-3.1
2,004,522	+		Psyr_1762	0.83	+1.4
2,004,522	+		Psyr_1762	0.83	-0.1
2,004,522	+		Psyr_1762	0.83	-3.5
2,004,522	+		Psyr_1762	0.83	-0.1
2,004,522	+		Psyr_1762	0.83	+0.9
2,004,522	+		Psyr_1762	0.83	-3.5
2,004,522	+		Psyr_1762	0.83	-2.3
2,004,522	+		Psyr_1762	0.83	-3.0
2,004,522	+		Psyr_1762	0.83	-3.1
2,004,522	+		Psyr_1762	0.83	+0.9
2,004,522	+		Psyr_1762	0.83	-3.1
2,004,522	+		Psyr_1762	0.83	-0.1
2,004,522	+		Psyr_1762	0.83	+2.2
2,004,522	+		Psyr_1762	0.83	-4.9
2,004,522	+		Psyr_1762	0.83	-3.6
2,004,522	+		Psyr_1762	0.83	-0.1
2,004,522	+		Psyr_1762	0.83	-2.5
2,004,523	-		Psyr_1762	0.83	+2.2
2,004,523	-		Psyr_1762	0.83	-5.9
2,004,523	-		Psyr_1762	0.83	-2.7
2,004,523	-		Psyr_1762	0.83	-5.4
2,004,523	-		Psyr_1762	0.83	-2.0
2,004,523	-		Psyr_1762	0.83	-4.2
2,004,523	-		Psyr_1762	0.83	-4.5
2,004,523	-		Psyr_1762	0.83	+0.9
2,004,523	-		Psyr_1762	0.83	-0.1
2,004,523	-		Psyr_1762	0.83	-0.1
2,004,523	-		Psyr_1762	0.83	-3.1
2,004,526	+		Psyr_1762	0.84	-0.1
2,004,526	+		Psyr_1762	0.84	-3.9
2,004,526	+		Psyr_1762	0.84	-5.2
2,004,526	+		Psyr_1762	0.84	-2.8
2,004,526	+		Psyr_1762	0.84	-0.1
2,004,526	+		Psyr_1762	0.84	-2.7
2,004,527	-		Psyr_1762	0.84	-2.0
2,004,527	-		Psyr_1762	0.84	-0.1
2,004,632	+				+3.4
2,005,197	+				-1.9
2,005,197	+				+3.2
2,005,197	+				-1.2
2,005,197	+				+3.9
2,005,197	+				-1.3
2,005,197	+				-0.3
2,005,197	+				-1.3