Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1584

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
1,778,090	+		Psyr_1583	0.27	-4.9
1,778,090	+		Psyr_1583	0.27	-1.3
1,778,127	+		Psyr_1583	0.31	-1.3
1,778,127	+		Psyr_1583	0.31	+3.6
1,778,127	+		Psyr_1583	0.31	-0.6
1,778,127	+		Psyr_1583	0.31	-2.3
1,778,127	+		Psyr_1583	0.31	+2.6
1,778,127	+		Psyr_1583	0.31	+1.6
1,778,127	+		Psyr_1583	0.31	+5.0
1,778,127	+		Psyr_1583	0.31	-1.3
1,778,127	+		Psyr_1583	0.31	+3.2
1,778,127	+		Psyr_1583	0.31	-4.1
1,778,127	+		Psyr_1583	0.31	+2.6
1,778,127	+		Psyr_1583	0.31	+3.3
1,778,127	+		Psyr_1583	0.31	+2.0
1,778,128	-		Psyr_1583	0.31	-2.5
1,778,128	-		Psyr_1583	0.31	+0.8
1,778,128	-		Psyr_1583	0.31	+1.0
1,778,128	-		Psyr_1583	0.31	-3.3
1,778,128	-		Psyr_1583	0.31	-0.5
1,778,128	-		Psyr_1583	0.31	+0.1
1,778,128	-		Psyr_1583	0.31	-0.1
1,778,128	-		Psyr_1583	0.31	+0.9
1,778,128	-		Psyr_1583	0.31	-1.3
1,778,128	-		Psyr_1583	0.31	+0.4
1,778,128	-		Psyr_1583	0.31	-1.2
1,778,128	-		Psyr_1583	0.31	-1.0
1,778,128	-		Psyr_1583	0.31	+5.0
1,778,128	-		Psyr_1583	0.31	+0.3
1,778,246	+		Psyr_1583	0.43	+1.3
1,778,342	+		Psyr_1583	0.53	+2.3
1,778,377	+		Psyr_1583	0.56	-0.9
1,778,377	+		Psyr_1583	0.56	-1.4
1,778,396	+		Psyr_1583	0.58	+3.5
1,778,396	+		Psyr_1583	0.58	-1.0
1,778,397	-		Psyr_1583	0.58	+0.1
1,778,398	+		Psyr_1583	0.58	-0.8
1,778,398	+		Psyr_1583	0.58	-1.7
1,778,398	+		Psyr_1583	0.58	-1.2
1,778,747	+				+2.0
1,778,747	+				-2.7
1,778,748	-				+1.6
1,778,848	+				+2.0
1,778,848	+				+1.0
1,778,848	+				+1.7
1,778,910	-				-0.7
1,779,039	+				-1.4
1,779,039	+				-2.5
1,779,039	+				+2.3
1,779,040	-				-1.5
1,779,040	-				-0.6
1,779,114	+		Psyr_1584	0.14	+2.6
1,779,115	-		Psyr_1584	0.14	+2.8
1,779,129	+		Psyr_1584	0.16	-2.2
1,779,129	+		Psyr_1584	0.16	-1.3
1,779,129	+		Psyr_1584	0.16	-0.0
1,779,129	+		Psyr_1584	0.16	+3.5
1,779,129	+		Psyr_1584	0.16	-1.7
1,779,129	+		Psyr_1584	0.16	-0.6
1,779,130	-		Psyr_1584	0.16	+1.0
1,779,160	-		Psyr_1584	0.19	-5.2
1,779,160	-		Psyr_1584	0.19	-0.6
1,779,252	+		Psyr_1584	0.29	-3.7
1,779,252	+		Psyr_1584	0.29	-0.7
1,779,252	+		Psyr_1584	0.29	-1.8
1,779,252	+		Psyr_1584	0.29	-3.1
1,779,252	+		Psyr_1584	0.29	-4.6
1,779,252	+		Psyr_1584	0.29	-1.2
1,779,253	-		Psyr_1584	0.29	-0.2
1,779,253	-		Psyr_1584	0.29	-0.4
1,779,253	-		Psyr_1584	0.29	+1.0
1,779,253	-		Psyr_1584	0.29	-0.0
1,779,254	+		Psyr_1584	0.29	-1.5
1,779,254	+		Psyr_1584	0.29	-2.6
1,779,255	-		Psyr_1584	0.29	+1.6
1,779,255	-		Psyr_1584	0.29	-2.3
1,779,255	-		Psyr_1584	0.29	+0.5
1,779,255	-		Psyr_1584	0.29	-1.3
1,779,552	+		Psyr_1584	0.61	-0.2
1,779,553	-		Psyr_1584	0.61	+1.6
1,779,553	-		Psyr_1584	0.61	+1.8
1,779,594	+		Psyr_1584	0.65	-1.8
1,779,594	+		Psyr_1584	0.65	-1.4
1,779,594	+		Psyr_1584	0.65	+0.1
1,779,594	+		Psyr_1584	0.65	-3.3
1,779,594	+		Psyr_1584	0.65	+3.0
1,779,594	+		Psyr_1584	0.65	+2.0
1,779,595	-		Psyr_1584	0.66	+3.2
1,779,774	+		Psyr_1584	0.85	+2.0
1,779,774	+		Psyr_1584	0.85	-3.2
1,779,775	-		Psyr_1584	0.85	-3.1
1,779,775	-		Psyr_1584	0.85	+4.2
1,779,936	-				+4.6
1,779,936	-				+0.5
1,780,057	+				-0.2
1,780,057	+				-0.2
1,780,058	-				+1.6
1,780,115	+				-1.2
1,780,116	-				+1.0
1,780,391	+		Psyr_1585	0.12	-4.7
1,780,739	+		Psyr_1585	0.22	+1.0
1,780,874	+		Psyr_1585	0.26	+2.6