Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1235

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
1,392,473	+				-1.1
1,392,473	+				+0.8
1,392,985	-		Psyr_1234	0.59	+1.3
1,392,998	+		Psyr_1234	0.60	+4.6
1,392,998	+		Psyr_1234	0.60	-1.7
1,392,999	-		Psyr_1234	0.61	-1.7
1,392,999	-		Psyr_1234	0.61	-0.4
1,392,999	-		Psyr_1234	0.61	-2.6
1,392,999	-		Psyr_1234	0.61	+3.0
1,393,106	+		Psyr_1234	0.75	-1.8
1,393,107	-		Psyr_1234	0.75	-1.1
1,393,107	-		Psyr_1234	0.75	+3.4
1,393,193	+		Psyr_1234	0.86	+1.0
1,393,194	-		Psyr_1234	0.86	+2.0
1,393,280	+				+3.6
1,393,280	+				+3.4
1,393,281	-				-2.2
1,393,281	-				+2.6
1,393,281	-				+2.8
1,393,281	-				+3.8
1,393,694	+		Psyr_1235	0.51	-0.4
1,393,694	+		Psyr_1235	0.51	+1.2
1,393,694	+		Psyr_1235	0.51	+4.3
1,393,695	-		Psyr_1235	0.51	-1.9
1,393,695	-		Psyr_1235	0.51	-0.1
1,393,695	-		Psyr_1235	0.51	+2.8
1,393,887	+		Psyr_1235	0.76	+0.3
1,394,105	+				+0.2
1,394,105	+				-0.0
1,394,106	-				+3.0
1,394,121	+				-0.6
1,394,122	-				-0.2
1,394,200	+				+3.7
1,394,200	+				+3.0
1,394,200	+				-0.8
1,394,247	+				+2.3
1,394,247	+				-2.9
1,394,343	+		Psyr_1236	0.22	-1.4
1,394,343	+		Psyr_1236	0.22	-2.4
1,394,356	+		Psyr_1236	0.24	-1.8
1,394,639	+		Psyr_1236	0.82	+2.8
1,394,700	+				+0.5