Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0823

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
929,650	+				-0.8
929,650	+				+0.7
929,651	-				+3.5
929,782	+		Psyr_0822	0.14	+0.3
929,783	-		Psyr_0822	0.14	-4.5
930,524	+				+1.7
930,571	+				+0.1
930,572	-				-0.8
930,591	+				+3.8
930,591	+				+1.1
930,592	-				-1.0
930,592	-				+1.4
930,592	-				-1.4
930,619	+				+0.1
930,619	+				-0.5
930,619	+				+2.9
930,619	+				-0.6
930,619	+				-0.1
930,619	+				+0.1
930,619	+				-0.8
930,620	-				-0.1
930,620	-				+1.7
930,620	-				+4.2
930,620	-				-1.2
930,655	+				+0.5
931,003	+		Psyr_0823	0.23	+4.5
931,003	+		Psyr_0823	0.23	-2.9
931,004	-		Psyr_0823	0.23	+0.0
931,059	+		Psyr_0823	0.26	+3.8
931,059	+		Psyr_0823	0.26	+0.7
931,197	+		Psyr_0823	0.34	+1.1
931,198	-		Psyr_0823	0.34	+2.1
931,198	-		Psyr_0823	0.34	-2.9
931,326	+		Psyr_0823	0.41	+4.6
931,327	-		Psyr_0823	0.41	+3.5
931,577	+		Psyr_0823	0.56	+4.2
931,743	+		Psyr_0823	0.65	+4.0
931,743	+		Psyr_0823	0.65	+3.1
931,743	+		Psyr_0823	0.65	-2.1
931,743	+		Psyr_0823	0.65	+2.7
931,743	+		Psyr_0823	0.65	-0.7
931,743	+		Psyr_0823	0.65	+3.8
931,743	+		Psyr_0823	0.65	-2.0
931,743	+		Psyr_0823	0.65	-0.6
931,743	+		Psyr_0823	0.65	+0.3
931,743	+		Psyr_0823	0.65	+3.7
931,744	-		Psyr_0823	0.65	-1.3
931,744	-		Psyr_0823	0.65	+2.1
931,744	-		Psyr_0823	0.65	+3.7
931,744	-		Psyr_0823	0.65	+0.3
931,744	-		Psyr_0823	0.65	+2.5
931,744	-		Psyr_0823	0.65	-0.9
931,744	-		Psyr_0823	0.65	-1.5
931,744	-		Psyr_0823	0.65	+2.9
931,926	+		Psyr_0823	0.76	+4.3
931,926	+		Psyr_0823	0.76	+3.6
931,927	-		Psyr_0823	0.76	+1.1
931,927	-		Psyr_0823	0.76	+1.7
931,927	-		Psyr_0823	0.76	+1.1
931,988	+		Psyr_0823	0.79	-0.3
931,988	+		Psyr_0823	0.79	-0.9
931,989	-		Psyr_0823	0.79	+2.7
932,163	+		Psyr_0823	0.89	+1.9
932,163	+		Psyr_0823	0.89	-0.3
932,163	+		Psyr_0823	0.89	-1.6
932,163	+		Psyr_0823	0.89	+1.7
932,164	-		Psyr_0823	0.89	+0.1
932,164	-		Psyr_0823	0.89	+4.1
932,164	-		Psyr_0823	0.89	+2.1
932,164	-		Psyr_0823	0.89	+4.5
932,245	-				+3.6
932,289	+				-3.2
932,289	+				+0.1
932,289	+				+0.1
932,289	+				+0.4
932,290	-				+0.4
932,290	-				+1.3
932,290	-				-4.1
932,290	-				-1.3
932,783	+		Psyr_0824	0.34	-1.2
933,064	+		Psyr_0824	0.57	+0.4
933,065	-		Psyr_0824	0.57	+1.3
933,065	-		Psyr_0824	0.57	+2.9
933,103	+		Psyr_0824	0.61	-1.2
933,103	+		Psyr_0824	0.61	+0.1
933,103	+		Psyr_0824	0.61	+1.7
933,104	-		Psyr_0824	0.61	-1.1
933,199	+		Psyr_0824	0.69	-1.0
933,199	+		Psyr_0824	0.69	+4.1
933,199	+		Psyr_0824	0.69	+3.3
933,199	+		Psyr_0824	0.69	-1.0
933,200	-		Psyr_0824	0.69	-0.2
933,200	-		Psyr_0824	0.69	+0.1
933,200	-		Psyr_0824	0.69	+1.1
933,200	-		Psyr_0824	0.69	+2.5