Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0348

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
371,780	+				+0.1
371,780	+				-1.2
371,781	-				-2.0
371,781	-				-1.5
371,781	-				+2.1
371,781	-				-0.1
371,984	+				+3.4
371,984	+				+2.9
371,984	+				-1.7
371,984	+				-1.6
371,984	+				+3.8
371,984	+				-0.2
371,985	-				+0.2
371,985	-				-0.5
371,985	-				+1.9
372,199	+		Psyr_0347	0.12	+2.1
372,247	-		Psyr_0347	0.22	+0.3
372,386	+		Psyr_0347	0.50	+3.1
372,400	+		Psyr_0347	0.52	-1.8
372,400	+		Psyr_0347	0.52	-1.8
372,402	+		Psyr_0347	0.53	+3.4
372,457	-		Psyr_0347	0.64	+0.2
372,519	+		Psyr_0347	0.76	-0.3
372,623	+				+1.1
372,623	+				+1.0
372,623	+				+3.4
372,624	-				-1.9
372,624	-				+1.5
372,624	-				+2.4
372,624	-				-0.3
372,624	-				-1.5
372,624	-				-1.8
372,624	-				-0.2
372,624	-				+2.5
372,624	-				-1.8
372,624	-				-3.7
372,624	-				+0.9
372,624	-				+0.0
372,624	-				-2.1
372,624	-				-0.4
372,624	-				-1.6
372,681	+				-1.0
372,689	+				-0.5
372,689	+				+0.2
372,689	+				-1.5
372,689	+				+0.1
372,689	+				+0.2
372,689	+				+3.1
372,689	+				-0.7
372,689	+				-1.3
372,689	+				-1.2
372,690	-				-0.9
372,690	-				+3.3
372,690	-				+2.9
372,690	-				+1.6
372,708	+				-1.3
372,708	+				+1.5
372,708	+				+4.2
372,709	-				-0.5
372,709	-				+1.7
372,749	+				+2.4
372,749	+				+3.9
372,750	-				+3.9
372,750	-				+0.9
372,750	-				+2.1
372,750	-				-1.2
372,838	+		Psyr_0348	0.10	+1.7
372,839	-		Psyr_0348	0.10	+0.8
372,841	+		Psyr_0348	0.11	+2.2
372,841	+		Psyr_0348	0.11	+2.9
372,841	+		Psyr_0348	0.11	+1.0
372,841	+		Psyr_0348	0.11	+1.1
372,842	-		Psyr_0348	0.11	+0.5
372,842	-		Psyr_0348	0.11	-0.1
372,842	-		Psyr_0348	0.11	+0.8
372,842	-		Psyr_0348	0.11	-2.1
372,905	-		Psyr_0348	0.21	-2.0
373,287	-		Psyr_0348	0.82	+4.2
373,345	+				+2.7
373,345	+				+1.1
373,345	+				-2.0
373,345	+				-0.4
373,345	+				+0.2
373,345	+				-0.1
373,346	-				+2.7
373,346	-				+4.9
373,346	-				-1.5
373,346	-				+4.0
373,346	-				+3.8
373,346	-				+3.6
373,432	+				-2.8
373,432	+				-1.7
373,432	+				-1.6
373,432	+				+2.7
373,434	+				-1.6
373,435	-				-1.3
373,852	-		Psyr_0349	0.61	-1.3
373,971	+		Psyr_0349	0.80	-0.8
373,971	+		Psyr_0349	0.80	-0.1
373,971	+		Psyr_0349	0.80	-0.9
373,972	-		Psyr_0349	0.80	-0.4
373,972	-		Psyr_0349	0.80	+2.1
374,101	+				-2.5
374,102	-				-0.6
374,102	-				+1.4
374,110	-				-0.7
374,148	+				-1.8