Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0169

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
182,989	-		Psyr_0168	0.50	-1.4
183,116	+		Psyr_0168	0.58	-2.9
183,116	+		Psyr_0168	0.58	+3.8
183,117	-		Psyr_0168	0.58	+1.1
183,117	-		Psyr_0168	0.58	+2.8
183,117	-		Psyr_0168	0.58	+3.1
183,117	-		Psyr_0168	0.58	-1.3
183,272	+		Psyr_0168	0.68	+1.3
183,272	+		Psyr_0168	0.68	-0.9
183,273	-		Psyr_0168	0.68	-0.5
183,366	+		Psyr_0168	0.74	+1.5
183,366	+		Psyr_0168	0.74	+0.1
183,366	+		Psyr_0168	0.74	-2.6
183,366	+		Psyr_0168	0.74	-0.5
183,366	+		Psyr_0168	0.74	-0.3
183,366	+		Psyr_0168	0.74	-1.3
183,366	+		Psyr_0168	0.74	-2.0
183,367	-		Psyr_0168	0.74	+1.7
183,367	-		Psyr_0168	0.74	-1.7
183,367	-		Psyr_0168	0.74	+0.4
183,367	-		Psyr_0168	0.74	-1.6
183,464	+		Psyr_0168	0.81	-1.3
183,464	+		Psyr_0168	0.81	+2.1
183,464	+		Psyr_0168	0.81	-1.9
183,464	+		Psyr_0168	0.81	-0.4
183,465	-		Psyr_0168	0.81	-0.1
183,465	-		Psyr_0168	0.81	+2.9
183,465	-		Psyr_0168	0.81	+0.7
183,465	-		Psyr_0168	0.81	+2.5
183,465	-		Psyr_0168	0.81	-0.1
183,634	+				+0.1
183,635	-				+0.7
183,677	+				-2.7
183,678	-				+0.6
183,735	+				-1.3
183,735	+				+3.2
183,735	+				-1.8
183,735	+				-1.6
183,736	-				+1.2
183,736	-				+0.2
183,736	-				-0.4
183,736	-				-3.1
183,827	-				-0.4
183,833	+				-0.9
183,834	-				+1.7
183,898	+				-1.3
183,898	+				-0.2
183,898	+				-1.3
183,899	-				+3.5
183,899	-				-0.3
184,017	-				+5.0
184,403	+		Psyr_0169	0.51	-0.2
184,403	+		Psyr_0169	0.51	+4.2
184,403	+		Psyr_0169	0.51	-1.7
184,403	+		Psyr_0169	0.51	-1.7
184,404	-		Psyr_0169	0.51	+2.2
184,404	-		Psyr_0169	0.51	-0.3
184,404	-		Psyr_0169	0.51	-0.3
184,404	-		Psyr_0169	0.51	-2.1
184,751	+		Psyr_0169	0.90	-0.8
184,752	-				+1.0
184,842	+				+4.4
184,842	+				-3.6
184,842	+				+2.5
184,842	+				-0.3
184,842	+				-0.8
184,842	+				-1.3
184,842	+				+1.7
184,842	+				-0.1
184,842	+				+1.2
184,842	+				-1.7
184,842	+				-0.5
184,843	-				+0.2
184,843	-				-0.8
184,843	-				-2.3
184,843	-				-0.6
184,843	-				+5.0
184,843	-				+0.0
184,843	-				-0.5
184,843	-				+3.2
184,843	-				+1.0
184,843	-				+4.1
184,843	-				+1.2
184,843	-				+3.0
184,843	-				-0.1
184,843	-				+4.0
184,843	-				+3.5
184,843	-				-1.4
184,843	-				-1.6
184,843	-				-0.8
184,843	-				+0.0
184,843	-				+3.0
184,843	-				+3.2
184,843	-				-0.6
184,846	+				-1.9
184,846	+				+3.2
184,846	+				+4.2
184,847	-				+4.2
184,847	-				+2.3
184,847	-				+1.7
184,847	-				+2.5
184,855	+				+1.2
184,855	+				-0.7
184,856	-				-0.8
184,864	+				-1.2
184,865	-				+1.3
184,865	-				-2.5
184,865	-				-0.4
184,865	-				-0.3
184,947	+				-0.2
184,948	-				-0.4
184,948	-				+0.9
184,954	+				+2.7
184,954	+				-0.6
184,954	+				+0.2
184,954	+				-3.3
184,955	-				+2.2
184,955	-				-1.8
184,955	-				+4.2
184,955	-				-0.8
184,955	-				-1.6
185,169	-		Psyr_0170	0.37	-0.1
185,225	-		Psyr_0170	0.50	+0.7
185,385	+		Psyr_0170	0.89	+0.7
185,386	-		Psyr_0170	0.90	-0.6
185,445	-				-1.4
185,527	-				-0.8
185,554	+				+2.2
185,566	+				-1.0
185,682	+		Psyr_0171	0.11	+0.5
185,682	+		Psyr_0171	0.11	-0.1
185,682	+		Psyr_0171	0.11	-1.9
185,683	-		Psyr_0171	0.11	+0.2