Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0140

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
150,525	+		Psyr_0139	0.57	-0.7
150,526	-		Psyr_0139	0.57	-0.7
150,526	-		Psyr_0139	0.57	+2.5
150,543	+		Psyr_0139	0.58	-0.6
150,543	+		Psyr_0139	0.58	+1.0
150,543	+		Psyr_0139	0.58	-1.4
150,543	+		Psyr_0139	0.58	+1.5
150,543	+		Psyr_0139	0.58	+0.8
150,543	+		Psyr_0139	0.58	+2.2
150,543	+		Psyr_0139	0.58	+1.7
150,543	+		Psyr_0139	0.58	+1.2
150,543	+		Psyr_0139	0.58	-1.9
150,544	-		Psyr_0139	0.58	+0.0
150,544	-		Psyr_0139	0.58	-2.1
150,544	-		Psyr_0139	0.58	+2.2
150,544	-		Psyr_0139	0.58	+0.3
150,544	-		Psyr_0139	0.58	-0.3
150,544	-		Psyr_0139	0.58	+2.5
150,651	+		Psyr_0139	0.63	+3.6
150,652	-		Psyr_0139	0.63	+1.2
150,894	+		Psyr_0139	0.76	+2.5
150,894	+		Psyr_0139	0.76	-2.7
150,894	+		Psyr_0139	0.76	-2.0
150,894	+		Psyr_0139	0.76	+1.7
150,895	-		Psyr_0139	0.76	-0.3
150,895	-		Psyr_0139	0.76	+0.2
150,895	-		Psyr_0139	0.76	-2.3
150,895	-		Psyr_0139	0.76	+0.2
150,921	+		Psyr_0139	0.78	+2.2
150,987	+		Psyr_0139	0.81	+2.2
150,987	+		Psyr_0139	0.81	-2.0
150,987	+		Psyr_0139	0.81	-1.5
150,988	-		Psyr_0139	0.81	-0.6
150,988	-		Psyr_0139	0.81	-1.2
150,988	-		Psyr_0139	0.81	+3.2
150,988	-		Psyr_0139	0.81	+4.1
150,988	-		Psyr_0139	0.81	-0.2
150,988	-		Psyr_0139	0.81	+4.0
150,996	+		Psyr_0139	0.82	+3.3
151,117	-		Psyr_0139	0.88	+0.6
151,152	+				-0.7
151,155	+				-2.6
151,155	+				+3.5
151,155	+				+3.6
151,155	+				+3.0
151,155	+				+5.2
151,155	+				+3.0
151,155	+				+0.9
151,155	+				-0.7
151,155	+				-0.4
151,155	+				+3.3
151,155	+				-2.3
151,155	+				+3.0
151,155	+				-4.5
151,155	+				-0.9
151,155	+				+1.7
151,155	+				+3.2
151,155	+				-2.5
151,156	-				+0.2
151,156	-				-1.1
151,156	-				+2.5
151,156	-				-4.0
151,156	-				+1.7
151,156	-				-1.6
151,156	-				-0.8
151,156	-				-0.1
151,156	-				-1.1
151,156	-				-0.2
151,156	-				+4.2
151,156	-				-2.1
151,156	-				+3.3
151,156	-				-0.5
151,156	-				+3.2
151,156	-				-1.7
151,156	-				-1.5
151,156	-				+2.7
151,156	-				+2.7
151,156	-				-0.3
151,156	-				+3.0
151,156	-				+4.3
151,156	-				-2.6
151,170	+				+3.5
151,170	+				+0.9
151,170	+				+0.2
151,170	+				-0.9
151,170	+				-2.0
151,170	+				-1.6
151,170	+				+3.2
151,170	+				+0.2
151,171	-				+3.6
151,171	-				+1.3
151,171	-				-2.0
151,171	-				-0.2
151,171	-				+5.2
151,171	-				-2.6
151,171	-				+1.1
151,171	-				-2.4
151,173	+				+0.2
151,236	+				-0.7
151,236	+				-1.9
151,236	+				-1.0
151,236	+				-0.2
151,237	-				-1.2
151,336	-				-1.4
151,336	-				+2.2
151,351	+				+0.7
151,351	+				-0.4
151,352	-				+2.5
151,352	-				+3.6
151,585	+		Psyr_0140	0.23	-0.8
151,586	-		Psyr_0140	0.23	-2.0
151,636	+		Psyr_0140	0.28	-1.5
151,636	+		Psyr_0140	0.28	-1.5
151,637	-		Psyr_0140	0.28	-0.5
151,750	+		Psyr_0140	0.38	-1.1
151,900	+		Psyr_0140	0.52	-0.7
151,900	+		Psyr_0140	0.52	-1.0
151,900	+		Psyr_0140	0.52	-1.5
151,900	+		Psyr_0140	0.52	+0.2
151,900	+		Psyr_0140	0.52	+2.2
151,900	+		Psyr_0140	0.52	-2.4
151,901	-		Psyr_0140	0.52	+3.0
151,901	-		Psyr_0140	0.52	-1.0
151,978	+		Psyr_0140	0.60	-0.5
151,978	+		Psyr_0140	0.60	-1.2
151,978	+		Psyr_0140	0.60	-0.8
151,978	+		Psyr_0140	0.60	-2.1
151,979	-		Psyr_0140	0.60	+3.7
151,979	-		Psyr_0140	0.60	+1.0
152,083	+		Psyr_0140	0.69	-0.3
152,131	+		Psyr_0140	0.74	-1.8
152,256	+		Psyr_0140	0.86	+3.2
152,256	+		Psyr_0140	0.86	+3.5
152,257	-		Psyr_0140	0.86	-1.0
152,362	+				+3.3
152,363	-				+2.7
152,363	-				-3.2
152,574	+		Psyr_0141	0.16	+0.2
152,574	+		Psyr_0141	0.16	-1.0
152,574	+		Psyr_0141	0.16	+2.7
152,574	+		Psyr_0141	0.16	+1.2
152,574	+		Psyr_0141	0.16	+3.0
152,574	+		Psyr_0141	0.16	+1.0
152,574	+		Psyr_0141	0.16	-0.4
152,574	+		Psyr_0141	0.16	-1.0
152,575	-		Psyr_0141	0.16	+2.5
152,575	-		Psyr_0141	0.16	-0.9
152,575	-		Psyr_0141	0.16	+0.6
152,575	-		Psyr_0141	0.16	-1.1
152,575	-		Psyr_0141	0.16	-1.0
152,595	+		Psyr_0141	0.18	-0.0
152,595	+		Psyr_0141	0.18	-1.6
152,595	+		Psyr_0141	0.18	+4.4
152,595	+		Psyr_0141	0.18	-0.1
152,595	+		Psyr_0141	0.18	-3.1
152,595	+		Psyr_0141	0.18	+3.0
152,595	+		Psyr_0141	0.18	-0.9
152,595	+		Psyr_0141	0.18	-0.1
152,595	+		Psyr_0141	0.18	-2.5
152,596	-		Psyr_0141	0.18	-5.5
152,596	-		Psyr_0141	0.18	-1.8
152,596	-		Psyr_0141	0.18	-1.6
152,596	-		Psyr_0141	0.18	+2.5
152,596	-		Psyr_0141	0.18	-1.8
152,596	-		Psyr_0141	0.18	+0.7
152,596	-		Psyr_0141	0.18	+1.2
152,596	-		Psyr_0141	0.18	+1.2
152,596	-		Psyr_0141	0.18	+2.7
152,596	-		Psyr_0141	0.18	-0.5
152,596	-		Psyr_0141	0.18	-1.0
152,640	+		Psyr_0141	0.23	+3.2
152,641	-		Psyr_0141	0.23	+0.3
152,652	+		Psyr_0141	0.24	-0.1
152,652	+		Psyr_0141	0.24	-0.0
152,653	-		Psyr_0141	0.24	-0.8
152,653	-		Psyr_0141	0.24	-1.4
152,653	-		Psyr_0141	0.24	-1.5
152,653	-		Psyr_0141	0.24	-3.7
152,653	-		Psyr_0141	0.24	-0.9
152,716	-		Psyr_0141	0.30	+3.7
152,730	+		Psyr_0141	0.31	+0.3
152,730	+		Psyr_0141	0.31	-4.4
152,730	+		Psyr_0141	0.31	-0.7
152,730	+		Psyr_0141	0.31	+4.1
152,730	+		Psyr_0141	0.31	+4.8
152,730	+		Psyr_0141	0.31	+0.8
152,730	+		Psyr_0141	0.31	+0.1
152,731	-		Psyr_0141	0.31	-1.3
152,911	-		Psyr_0141	0.49	-1.8
152,979	+		Psyr_0141	0.56	+0.6
152,979	+		Psyr_0141	0.56	+0.9
152,980	-		Psyr_0141	0.56	-1.0
152,980	-		Psyr_0141	0.56	-1.3
153,111	+		Psyr_0141	0.69	-1.7
153,111	+		Psyr_0141	0.69	+2.7
153,112	-		Psyr_0141	0.69	-1.3
153,112	-		Psyr_0141	0.69	+0.2
153,112	-		Psyr_0141	0.69	+4.5
153,112	-		Psyr_0141	0.69	-0.6
153,112	-		Psyr_0141	0.69	-1.9
153,112	-		Psyr_0141	0.69	-0.9
153,201	+		Psyr_0141	0.77	-1.6
153,201	+		Psyr_0141	0.77	-1.3
153,201	+		Psyr_0141	0.77	+4.5
153,202	-		Psyr_0141	0.78	+0.2
153,202	-		Psyr_0141	0.78	-1.2