Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0103

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
113,516	-				-1.6
113,523	-				-1.2
113,534	+				+0.3
113,534	+				+1.7
113,535	-				-4.2
113,535	-				-0.2
113,535	-				+0.2
113,654	-				+1.3
113,735	+				+1.7
113,736	-				-2.6
113,737	+				-3.1
113,737	+				-2.0
113,737	+				-1.0
113,737	+				+0.2
113,737	+				-2.1
113,737	+				-0.2
113,737	+				+0.7
113,737	+				-4.6
113,738	-				-0.5
113,738	-				+0.2
113,738	-				-2.4
113,751	+				-2.6
113,751	+				+1.7
113,755	+				+1.7
113,755	+				+0.2
113,755	+				+2.5
113,755	+				+2.5
113,755	+				+3.3
113,755	+				+3.3
113,755	+				+1.5
113,755	+				-0.2
113,755	+				+1.2
113,755	+				-1.3
113,755	+				-1.2
113,755	+				-0.2
113,755	+				+0.2
113,755	+				+1.7
113,755	+				+2.0
113,756	-				-1.8
113,756	-				-1.5
113,756	-				-0.3
113,756	-				-1.0
113,756	-				-0.6
113,756	-				+2.7
113,756	-				-3.0
113,756	-				+2.7
113,756	-				+1.7
113,756	-				+0.9
113,756	-				-1.4
113,793	+				-0.1
113,793	+				+3.0
113,793	+				+2.5
113,794	-				-2.0
113,804	-				+0.2
113,875	+				+1.7
113,875	+				-1.3
113,876	-				-0.1
113,876	-				-1.7
113,876	-				+0.4
113,876	-				+0.7
113,876	-				+0.8
113,876	-				-2.4
113,963	+				+0.2
113,964	-				+4.2
114,021	+		Psyr_0102	0.19	-1.3
114,021	+		Psyr_0102	0.19	-1.6
114,021	+		Psyr_0102	0.19	+0.2
114,021	+		Psyr_0102	0.19	+3.0
114,021	+		Psyr_0102	0.19	-1.1
114,021	+		Psyr_0102	0.19	+1.7
114,021	+		Psyr_0102	0.19	+1.7
114,022	-		Psyr_0102	0.19	+2.5
114,022	-		Psyr_0102	0.19	-1.2
114,022	-		Psyr_0102	0.19	-0.3
114,022	-		Psyr_0102	0.19	+2.2
114,022	-		Psyr_0102	0.19	-0.8
114,022	-		Psyr_0102	0.19	-1.0
114,024	+		Psyr_0102	0.20	+0.0
114,025	-		Psyr_0102	0.20	-0.1
114,025	-		Psyr_0102	0.20	-2.5
114,028	+		Psyr_0102	0.20	+1.2
114,028	+		Psyr_0102	0.20	-1.2
114,029	-		Psyr_0102	0.21	+0.2
114,029	-		Psyr_0102	0.21	+3.6
114,029	-		Psyr_0102	0.21	+1.6
114,086	+		Psyr_0102	0.30	-1.9
114,086	+		Psyr_0102	0.30	+3.3
114,087	-		Psyr_0102	0.30	-2.7
114,119	-		Psyr_0102	0.36	-1.0
114,144	+		Psyr_0102	0.40	-0.7
114,165	-		Psyr_0102	0.43	+0.3
114,224	+		Psyr_0102	0.53	+3.2
114,224	+		Psyr_0102	0.53	-0.1
114,224	+		Psyr_0102	0.53	+1.7
114,225	-		Psyr_0102	0.53	+1.7
114,225	-		Psyr_0102	0.53	-0.8
114,227	+		Psyr_0102	0.54	+1.2
114,228	-		Psyr_0102	0.54	+0.2
114,228	-		Psyr_0102	0.54	+0.2
114,246	-		Psyr_0102	0.57	-2.9
114,269	+		Psyr_0102	0.61	+1.2
114,269	+		Psyr_0102	0.61	-0.2
114,270	-		Psyr_0102	0.61	+0.2
114,311	+		Psyr_0102	0.68	-2.6
114,311	+		Psyr_0102	0.68	+0.3
114,311	+		Psyr_0102	0.68	+1.7
114,360	+		Psyr_0102	0.76	+2.7
114,360	+		Psyr_0102	0.76	-1.2
114,360	+		Psyr_0102	0.76	-0.8
114,360	+		Psyr_0102	0.76	+2.7
114,360	+		Psyr_0102	0.76	-0.3
114,360	+		Psyr_0102	0.76	+2.7
114,360	+		Psyr_0102	0.76	-0.1
114,360	+		Psyr_0102	0.76	-0.5
114,361	-		Psyr_0102	0.76	-4.0
114,361	-		Psyr_0102	0.76	+0.2
114,361	-		Psyr_0102	0.76	-1.3
114,361	-		Psyr_0102	0.76	+3.2
114,390	-		Psyr_0102	0.81	-1.6
114,396	-		Psyr_0102	0.82	-0.1
114,409	+		Psyr_0102	0.84	-2.4
114,410	-		Psyr_0102	0.84	-3.4
114,413	+		Psyr_0102	0.85	+3.2
114,413	+		Psyr_0102	0.85	-0.9
114,414	-		Psyr_0102	0.85	-0.7
114,414	-		Psyr_0102	0.85	+0.2
114,561	-		Psyr_0103	0.12	-3.4
114,625	-		Psyr_0103	0.29	-3.3
114,658	-		Psyr_0103	0.38	-1.3
114,717	+		Psyr_0103	0.54	+3.0
114,717	+		Psyr_0103	0.54	+0.3
114,717	+		Psyr_0103	0.54	-0.3
114,718	-		Psyr_0103	0.54	-1.3
114,718	-		Psyr_0103	0.54	-0.9
114,718	-		Psyr_0103	0.54	+1.2
114,718	-		Psyr_0103	0.54	-1.2
114,718	-		Psyr_0103	0.54	-1.0
114,757	+		Psyr_0103	0.64	-0.2
114,774	-		Psyr_0103	0.69	-1.1
114,808	+		Psyr_0103	0.78	-1.5
114,808	+		Psyr_0103	0.78	-2.8
114,809	-		Psyr_0103	0.78	-1.1
114,909	-				+1.5
114,935	+				-0.8
114,992	+				-1.8
114,993	-				-0.4
114,996	-				-0.5
115,014	+				-0.0
115,015	-				-0.9
115,015	-				-1.0
115,015	-				+0.7
115,015	-				+3.6
115,015	-				+3.6
115,065	+				-2.4
115,066	-				+0.4
115,071	+				+2.7
115,071	+				-3.0
115,071	+				+3.3
115,072	-				+2.7
115,072	-				-2.3
115,072	-				-2.0
115,072	-				-0.4
115,072	-				-2.2
115,072	-				-1.2
115,072	-				-0.8
115,072	-				-0.6
115,072	-				-0.3
115,080	+				-1.5
115,081	-				-2.0
115,150	+				-0.6
115,168	+				-0.7
115,168	+				-1.2
115,169	-				-0.6
115,169	-				-3.2
115,204	+				+0.7
115,204	+				+0.1
115,240	+				-1.1
115,241	-				-1.6
115,241	-				-0.3
115,273	-				-1.3
115,321	+				-0.3
115,322	-				+2.2
115,322	-				+2.5
115,353	+				+1.7
115,353	+				+0.6
115,354	-				+1.7
115,354	-				-2.2
115,371	-				+1.2
115,382	+				+0.8
115,382	+				-1.2
115,383	-				+3.7
115,383	-				-0.9
115,383	-				-1.6
115,418	-				+2.0
115,418	-				+0.9
115,570	+				-1.8
115,570	+				-1.0
115,571	-				-0.1
115,585	+				+0.6
115,586	-				+0.3
115,622	+				+2.7
115,622	+				+4.9
115,622	+				+3.5
115,622	+				+4.2
115,622	+				+0.4
115,622	+				+1.3
115,622	+				+1.3
115,622	+				+3.6
115,623	-				+3.5
115,623	-				+2.5
115,623	-				+1.2
115,623	-				-1.3
115,623	-				-0.3
115,623	-				+2.7
115,623	-				+3.5
115,623	-				-3.0
115,654	-				-1.0
115,727	-				-1.4
115,737	+				+0.2
115,737	+				+1.2
115,770	+				-2.3
115,770	+				-1.2
115,771	-				+3.5
115,771	-				+0.5
115,771	-				+2.5
115,786	+				+1.2
115,786	+				-0.6
115,787	-				-1.7
115,787	-				+0.2
115,787	-				+0.2
115,787	-				-2.8
115,787	-				-0.2
115,787	-				-0.7
115,885	+		Psyr_0104	0.15	-1.3
115,886	-		Psyr_0104	0.15	+0.6