Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0076

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
81,521	+				-0.4
81,532	+				+3.3
81,532	+				-0.5
81,532	+				+3.6
81,533	-				+0.9
81,560	+				+4.7
81,561	-				-2.3
81,561	-				-2.3
81,561	-				-1.1
81,561	-				+0.4
81,561	-				+1.7
81,561	-				-0.9
81,603	+				-2.5
81,603	+				-2.7
81,603	+				-2.0
81,603	+				+3.6
81,604	-				-0.9
81,604	-				+0.2
81,604	-				+1.7
81,851	+		Psyr_0076	0.51	-0.4
81,851	+		Psyr_0076	0.51	-1.1
81,851	+		Psyr_0076	0.51	+0.2
81,852	-		Psyr_0076	0.51	+2.7
81,852	-		Psyr_0076	0.51	-1.2
81,852	-		Psyr_0076	0.51	+0.7
82,130	+				-1.3
82,130	+				-0.1
82,130	+				-1.1
82,130	+				+2.2
82,130	+				-1.0
82,131	-				-3.5
82,131	-				-2.2
82,131	-				+0.8
82,131	-				-0.7
82,192	+				-0.6
82,193	-				+4.6
82,193	-				-0.4
82,193	-				+1.2
82,421	+				-0.8
82,421	+				+1.1
82,425	+				+0.3
82,425	+				+2.2
82,425	+				+1.8
82,425	+				-2.0
82,425	+				-0.5
82,425	+				+0.2
82,426	-				+0.9
82,426	-				-0.9
82,426	-				+2.5
82,426	-				+2.2
82,426	-				+4.2
82,535	+				+1.4
82,649	+				+0.4
82,649	+				+1.5
82,649	+				+1.1
82,711	+				+2.5
82,867	-		Psyr_0077	0.11	+0.7
82,898	+		Psyr_0077	0.13	-0.9
82,942	+		Psyr_0077	0.17	+1.2
82,946	+		Psyr_0077	0.17	+1.2
82,947	-		Psyr_0077	0.17	-2.0
82,947	-		Psyr_0077	0.17	-1.0
82,947	-		Psyr_0077	0.17	-0.8
82,947	-		Psyr_0077	0.17	+0.2
82,964	+		Psyr_0077	0.18	+3.2
82,964	+		Psyr_0077	0.18	-2.2
82,964	+		Psyr_0077	0.18	+0.4
82,965	-		Psyr_0077	0.18	+2.2
82,965	-		Psyr_0077	0.18	+1.9
82,965	-		Psyr_0077	0.18	+0.6
82,965	-		Psyr_0077	0.18	+0.4
82,965	-		Psyr_0077	0.18	+1.2
82,965	-		Psyr_0077	0.18	-0.0
82,965	-		Psyr_0077	0.18	+2.5
82,965	-		Psyr_0077	0.18	+0.1
83,001	+		Psyr_0077	0.21	-1.4
83,001	+		Psyr_0077	0.21	-0.0
83,002	-		Psyr_0077	0.21	-1.0
83,002	-		Psyr_0077	0.21	+3.0