Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_984

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,112,304	+		Pf1N1B4_983	0.45	-0.7
1,112,304	+		Pf1N1B4_983	0.45	-0.6
1,112,562	+				+0.6
1,112,562	+		Pf1N1B4_983	0.63	-1.3
1,112,562	+		Pf1N1B4_983	0.63	-3.4
1,112,563	-		Pf1N1B4_983	0.63	+1.1
1,112,563	-		Pf1N1B4_983	0.63	+0.3
1,112,563	-		Pf1N1B4_983	0.63	-1.5
1,112,563	-		Pf1N1B4_983	0.63	-0.3
1,112,563	-		Pf1N1B4_983	0.63	-0.4
1,112,669	+		Pf1N1B4_983	0.70	-1.9
1,112,743	+		Pf1N1B4_983	0.75	-1.7
1,112,823	+		Pf1N1B4_983	0.80	+0.1
1,112,858	+		Pf1N1B4_983	0.83	-0.7
1,112,858	+		Pf1N1B4_983	0.83	-3.2
1,112,859	-		Pf1N1B4_983	0.83	-1.3
1,112,916	+		Pf1N1B4_983	0.87	+0.3
1,112,916	+		Pf1N1B4_983	0.87	-1.0
1,112,917	-		Pf1N1B4_983	0.87	-1.7
1,112,920	-		Pf1N1B4_983	0.87	-0.3
1,112,920	-		Pf1N1B4_983	0.87	-1.9
1,112,920	-		Pf1N1B4_983	0.87	-0.9
1,112,920	-		Pf1N1B4_983	0.87	-1.0
1,112,920	-		Pf1N1B4_983	0.87	+0.6
1,112,952	+		Pf1N1B4_983	0.89	-1.0
1,112,952	+				+0.3
1,112,952	+				-1.5
1,112,953	-		Pf1N1B4_983	0.89	+0.8
1,112,953	-		Pf1N1B4_983	0.89	-1.4
1,113,131	-				+1.3
1,113,131	-				-1.7
1,113,148	+				-0.7
1,113,148	+				-1.1
1,113,174	+				-2.0
1,113,174	+				-0.6
1,113,174	+				-1.0
1,113,175	-				-1.8
1,113,175	-				-0.3
1,113,526	-		Pf1N1B4_984	0.32	-1.7
1,113,643	+		Pf1N1B4_984	0.42	-0.7
1,113,693	-		Pf1N1B4_984	0.46	-2.0
1,113,701	+		Pf1N1B4_984	0.47	-1.7
1,113,701	+		Pf1N1B4_984	0.47	-1.3
1,113,701	+		Pf1N1B4_984	0.47	-1.0
1,113,701	+		Pf1N1B4_984	0.47	+1.7
1,113,701	+		Pf1N1B4_984	0.47	-0.7
1,113,701	+		Pf1N1B4_984	0.47	-1.0
1,113,702	-		Pf1N1B4_984	0.47	-0.3
1,113,856	-		Pf1N1B4_984	0.60	-1.0
1,113,856	-		Pf1N1B4_984	0.60	-1.0
1,113,856	-				-0.7
1,113,989	+		Pf1N1B4_984	0.72	-1.3
1,114,317	-				-1.0
1,114,317	-				+0.6
1,114,341	+				-1.7
1,114,419	+				+3.1
1,114,420	-				+0.3
1,114,463	+				-1.8
1,114,580	+		Pf1N1B4_985	0.16	-2.4
1,114,580	+		Pf1N1B4_985	0.16	-0.5
1,114,581	-		Pf1N1B4_985	0.16	+0.1
1,114,581	-		Pf1N1B4_985	0.16	-0.0
1,114,605	-		Pf1N1B4_985	0.18	+0.2
1,114,686	-		Pf1N1B4_985	0.23	+1.5
1,114,686	-		Pf1N1B4_985	0.23	+0.3
1,114,686	-		Pf1N1B4_985	0.23	-0.7
1,114,686	-		Pf1N1B4_985	0.23	-1.8
1,114,851	-		Pf1N1B4_985	0.34	-0.3
1,114,851	-		Pf1N1B4_985	0.34	+0.3
1,114,973	+		Pf1N1B4_985	0.42	-1.8
1,114,973	+		Pf1N1B4_985	0.42	-1.8
1,114,973	+		Pf1N1B4_985	0.42	-1.0
1,114,974	-		Pf1N1B4_985	0.42	+0.3
1,114,974	-		Pf1N1B4_985	0.42	+0.3
1,114,974	-		Pf1N1B4_985	0.42	-0.0
1,114,974	-		Pf1N1B4_985	0.42	+0.6
1,115,039	+				-1.7
1,115,039	+		Pf1N1B4_985	0.47	-1.5
1,115,040	-		Pf1N1B4_985	0.47	-0.3
1,115,040	-		Pf1N1B4_985	0.47	-1.5
1,115,040	-		Pf1N1B4_985	0.47	-0.7
1,115,279	+		Pf1N1B4_985	0.63	-0.0