Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5679

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
115,867	+				+1.9
115,906	+		Pf1N1B4_5678	0.66	-2.5
115,906	+				-0.1
116,260	+		Pf1N1B4_5678	0.83	-1.4
116,260	+				-0.7
116,261	-		Pf1N1B4_5678	0.83	+0.3
116,422	+				-1.7
116,453	-				-0.5
116,463	-				-2.7
116,464	+				-1.0
116,464	+				+0.1
116,464	+				-2.2
116,473	+				+0.6
116,474	-				+1.5
116,523	+				+0.2
116,633	+				+0.5
116,633	+				-0.3
116,775	+				-1.7
116,775	+				-1.2
116,778	-				-0.8
116,778	-				-0.7
116,933	+				-0.5
117,094	+				+0.0
117,214	+		Pf1N1B4_5679	0.14	+1.1
117,615	+				+0.5
117,615	+		Pf1N1B4_5679	0.27	-1.1
117,615	+		Pf1N1B4_5679	0.27	-1.7
117,693	+		Pf1N1B4_5679	0.29	-0.1
117,694	-		Pf1N1B4_5679	0.29	-0.9
117,738	+				-0.7
117,739	-		Pf1N1B4_5679	0.31	+2.5
117,965	-		Pf1N1B4_5679	0.38	-1.9
117,965	-				+1.3
117,965	-		Pf1N1B4_5679	0.38	+0.6
118,000	-		Pf1N1B4_5679	0.39	-0.7
118,021	+		Pf1N1B4_5679	0.40	-0.1
118,288	+		Pf1N1B4_5679	0.49	-0.3
118,660	-		Pf1N1B4_5679	0.61	+1.9
118,660	-		Pf1N1B4_5679	0.61	-0.5
118,660	-		Pf1N1B4_5679	0.61	-0.1
118,660	-		Pf1N1B4_5679	0.61	+0.7
118,660	-		Pf1N1B4_5679	0.61	-2.1
118,713	-		Pf1N1B4_5679	0.62	-0.1
118,713	-		Pf1N1B4_5679	0.62	+0.6
118,716	+		Pf1N1B4_5679	0.62	+0.5
118,716	+		Pf1N1B4_5679	0.62	-1.6
118,717	-		Pf1N1B4_5679	0.62	+1.4
118,851	+		Pf1N1B4_5679	0.67	-3.1
118,852	-		Pf1N1B4_5679	0.67	+0.9
119,418	-		Pf1N1B4_5679	0.85	-1.5
119,418	-		Pf1N1B4_5679	0.85	-0.1
119,418	-		Pf1N1B4_5679	0.85	-0.7
119,557	-		Pf1N1B4_5679	0.90	+1.6
119,667	-				-2.7
119,960	+				-1.1
119,961	-				-0.7
119,964	-				-1.1
120,098	-				+1.5
120,098	-		Pf1N1B4_5680	0.16	-0.6
120,098	-		Pf1N1B4_5680	0.16	+1.9
120,256	+		Pf1N1B4_5680	0.27	-0.7
120,594	-		Pf1N1B4_5680	0.51	+0.3
120,594	-		Pf1N1B4_5680	0.51	-1.5
120,616	+		Pf1N1B4_5680	0.53	+1.3
120,675	+		Pf1N1B4_5680	0.57	+0.6
120,675	+		Pf1N1B4_5680	0.57	-1.5
120,676	-		Pf1N1B4_5680	0.57	-0.3
120,818	-				+0.9
120,818	-		Pf1N1B4_5680	0.67	+0.5