Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5382

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
114,012	+				+1.2
114,012	+				-1.5
114,012	+				-0.8
114,012	+				-2.3
114,012	+				-1.5
114,012	+				-2.4
114,012	+				-2.7
114,013	-				-0.2
114,013	-				+0.8
114,013	-				-0.4
114,035	+				-1.5
114,101	+				-2.0
114,109	-				+1.2
114,143	+				-0.2
114,143	+				+0.8
114,143	+				-0.8
114,143	+				-1.5
114,143	+				-2.4
114,143	+				+0.8
114,143	+				+0.8
114,143	+				-1.0
114,143	+				-1.9
114,143	+				-0.7
114,143	+				-1.2
114,143	+				-2.5
114,143	+				-1.5
114,143	+				+1.2
114,143	+				-0.2
114,143	+				-2.2
114,143	+				-2.2
114,144	-				-0.6
114,144	-				+0.2
114,144	-				+0.1
114,147	+				-0.9
114,147	+				-1.5
114,147	+				-1.5
114,147	+				+0.2
114,147	+				-0.2
114,147	+				-1.8
114,147	+				-0.5
114,147	+				-1.5
114,147	+				-2.7
114,147	+				-1.8
114,147	+				+1.4
114,148	-				+0.1
114,148	-				+0.3
114,148	-				+0.1
114,148	-				-0.2
114,163	+				-1.8
114,163	+				-3.2
114,163	+				-0.8
114,164	-				+0.0
114,181	+				+0.8
114,181	+				-1.7
114,281	+		Pf1N1B4_5381	0.35	-0.2
114,286	+		Pf1N1B4_5381	0.37	-0.2
114,286	+		Pf1N1B4_5381	0.37	+2.8
114,320	+		Pf1N1B4_5381	0.49	-2.0
114,321	-		Pf1N1B4_5381	0.49	-2.5
114,343	+				-0.8
114,343	+		Pf1N1B4_5381	0.57	-0.1
114,343	+		Pf1N1B4_5381	0.57	-0.5
114,343	+		Pf1N1B4_5381	0.57	-1.0
114,343	+		Pf1N1B4_5381	0.57	+1.0
114,343	+		Pf1N1B4_5381	0.57	-2.2
114,343	+		Pf1N1B4_5381	0.57	+0.8
114,343	+		Pf1N1B4_5381	0.57	-2.8
114,343	+		Pf1N1B4_5381	0.57	-0.7
114,400	+		Pf1N1B4_5381	0.77	-1.8
114,400	+		Pf1N1B4_5381	0.77	+0.5
114,400	+		Pf1N1B4_5381	0.77	-0.6
114,400	+		Pf1N1B4_5381	0.77	-0.1
114,400	+		Pf1N1B4_5381	0.77	-2.0
114,400	+		Pf1N1B4_5381	0.77	-1.2
114,400	+		Pf1N1B4_5381	0.77	-1.2
114,400	+		Pf1N1B4_5381	0.77	-1.2
114,401	-				-1.8
114,404	+		Pf1N1B4_5381	0.78	-0.4
114,404	+		Pf1N1B4_5381	0.78	+0.0
114,404	+		Pf1N1B4_5381	0.78	-0.9
114,404	+		Pf1N1B4_5381	0.78	-0.8
114,404	+		Pf1N1B4_5381	0.78	-1.2
114,404	+		Pf1N1B4_5381	0.78	-0.2
114,404	+		Pf1N1B4_5381	0.78	-1.0
114,405	-		Pf1N1B4_5381	0.79	+0.5
114,405	-		Pf1N1B4_5381	0.79	-1.8
114,434	+		Pf1N1B4_5381	0.89	-1.4
114,434	+		Pf1N1B4_5381	0.89	-0.6
114,532	+				-1.8
114,620	+				-0.4
114,620	+				+0.8
114,637	-				+0.1
114,684	+				+0.2
114,797	+				-0.8
114,797	+				-1.2
114,994	+				+0.2
114,995	-				+0.4
114,995	-				+0.4
115,027	+		Pf1N1B4_5382	0.17	-1.8
115,028	-		Pf1N1B4_5382	0.17	+0.4
115,210	+		Pf1N1B4_5382	0.58	-0.6
115,211	-		Pf1N1B4_5382	0.59	-0.8
115,211	-		Pf1N1B4_5382	0.59	-1.0
115,298	+		Pf1N1B4_5382	0.78	-0.8
115,299	-		Pf1N1B4_5382	0.78	+0.4
115,299	-		Pf1N1B4_5382	0.78	+0.1
115,406	+				-0.9
115,406	+				-3.0
115,415	+				-1.2
115,415	+				+0.1
115,415	+				-1.1
115,416	-				-0.5
115,434	+				-2.8
115,434	+				-1.6
115,434	+				-0.4
115,434	+				-3.0
115,434	+				-2.0
115,434	+				+0.5
115,434	+				-2.3
115,434	+				-1.1
115,434	+				-1.8
115,435	-				+1.6
115,478	+				+0.4
115,478	+				-2.4
115,479	-				-0.9
115,547	+				-2.2
115,547	+				-0.5
115,547	+				-1.5
115,548	-				-1.2
115,548	-				-1.5
115,645	+				-1.1
115,645	+				-0.7
115,645	+				-0.6
115,645	+				-3.5
115,645	+				-1.6
115,645	+				-1.3
115,645	+				-3.2
115,645	+				-3.1
115,645	+				-0.7
115,645	+				-0.6
115,645	+				-1.5
115,645	+				-0.8
115,645	+				-2.9
115,645	+				-1.0
115,646	-				-0.5
115,646	-				-0.2
115,646	-				-1.0
115,689	+				-1.7
115,689	+				-2.2
115,689	+				-1.2
115,689	+				-1.8
115,689	+				-1.2
115,689	+				-3.0
115,689	+				-2.0
115,689	+				-3.2
115,689	+				-1.4
115,690	-				-0.4
115,690	-				-0.8
115,690	-				-0.8
115,690	-				-0.4
115,723	+				-2.2
115,723	+				-2.7
115,723	+				-0.4
115,723	+				-2.0
115,723	+				-2.7
115,723	+				-1.4
115,723	+				-1.0
115,724	-				+1.2
115,736	+				-3.8
115,736	+				-2.6
115,882	-				-0.8
115,902	+				-0.2
115,902	+				-0.8
115,902	+				-1.8
115,948	+				-0.5
115,948	+				-1.9
115,952	+				-0.2
115,952	+				-2.3
115,952	+				-1.0
115,952	+				-1.2
115,952	+				-1.7
115,952	+				-1.4
115,952	+				-0.9
115,953	-				+0.0
115,976	+				-2.3
115,976	+				-0.8
115,976	+				-2.0
115,976	+				+0.2
115,989	+				-1.3
115,989	+				-1.7
116,000	+				-1.7
116,000	+				-1.4
116,000	+				-2.3
116,001	-				+0.4
116,036	+				-2.2
116,036	+				-2.0
116,036	+				-1.3
116,036	+				-1.7
116,037	-				+0.2
116,037	-				-0.0
116,093	+				-2.0
116,093	+				-1.1
116,093	+				-2.3
116,093	+				-1.9
116,093	+				-1.4
116,093	+				-2.5
116,094	-				-0.3
116,095	+				-1.2
116,095	+				-0.6
116,095	+				-1.7
116,095	+				-0.5
116,095	+				-2.3
116,095	+				-2.0
116,165	-				+0.2
116,188	+				-3.2
116,208	+				-2.1