Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5348

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
87,597	+		Pf1N1B4_5346	0.62	+2.0
87,835	+				+1.8
87,914	+				+1.6
87,914	+				-0.9
87,914	+				+1.8
87,915	-				+0.4
87,920	+				-0.2
87,986	-				-0.8
88,016	-				-1.2
88,495	-		Pf1N1B4_5348	0.33	-2.2
88,495	-		Pf1N1B4_5348	0.33	-1.7
88,495	-		Pf1N1B4_5348	0.33	-1.5
88,560	-				-0.2
88,560	-		Pf1N1B4_5348	0.86	-0.5
88,642	-				+1.6
88,671	+				+0.8
88,672	-				-0.5
88,793	-				+0.0
88,803	+				-0.1
88,804	-				-1.5
88,859	-				-1.2
88,874	+				-0.2
88,874	+				+0.0
88,875	-				-1.5
88,875	-				-1.2
88,893	+				+0.4
88,970	+				-1.5
88,970	+				-0.2
88,970	+				+1.8
88,970	+				-1.8
88,971	-				-1.3
88,971	-				+1.8
88,971	-				-0.2
88,976	+				+0.1
88,976	+				-0.6
88,976	+				+0.6
88,976	+				-0.9
88,977	-				-1.2
89,028	-				+0.0
89,028	-				+1.4
89,270	+				+0.4
89,270	+				-0.2
89,271	-				-2.7
89,271	-				+0.0
89,300	-				+1.1
89,390	-		Pf1N1B4_5349	0.11	-1.9
89,390	-		Pf1N1B4_5349	0.11	+0.6
89,390	-				+0.4
89,506	-		Pf1N1B4_5349	0.30	+0.2
89,506	-		Pf1N1B4_5349	0.30	-0.2
89,534	+		Pf1N1B4_5349	0.34	-0.2