Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5209

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,263,056	+				-1.3
3,263,056	+				+1.0
3,263,057	-				-2.8
3,263,057	-				-0.8
3,263,057	-				-0.3
3,263,096	+				-0.8
3,263,097	-				-1.3
3,263,137	+				-0.3
3,263,191	+				-0.4
3,263,192	-				+2.7
3,263,278	+		Pf1N1B4_2908	0.20	+0.2
3,263,279	-		Pf1N1B4_2908	0.21	-1.1
3,263,279	-				-0.8
3,263,293	+		Pf1N1B4_2908	0.23	+1.2
3,263,366	+		Pf1N1B4_2908	0.33	+0.7
3,263,366	+		Pf1N1B4_2908	0.33	+0.5
3,263,366	+		Pf1N1B4_2908	0.33	+0.2
3,263,366	+		Pf1N1B4_2908	0.33	-1.1
3,263,366	+		Pf1N1B4_2908	0.33	-0.1
3,263,367	-		Pf1N1B4_2908	0.33	-1.1
3,263,367	-		Pf1N1B4_2908	0.33	+0.9
3,263,370	+		Pf1N1B4_2908	0.34	+0.0
3,263,370	+		Pf1N1B4_2908	0.34	-0.6
3,263,370	+		Pf1N1B4_2908	0.34	+2.2
3,263,370	+		Pf1N1B4_2908	0.34	-0.1
3,263,370	+		Pf1N1B4_2908	0.34	-1.1
3,263,370	+		Pf1N1B4_2908	0.34	-0.3
3,263,371	-		Pf1N1B4_2908	0.34	-1.6
3,263,371	-		Pf1N1B4_2908	0.34	+0.6
3,263,371	-		Pf1N1B4_2908	0.34	+0.2
3,263,371	-		Pf1N1B4_2908	0.34	-1.1
3,263,371	-		Pf1N1B4_2908	0.34	+0.0
3,263,371	-		Pf1N1B4_2908	0.34	-1.1
3,263,383	+		Pf1N1B4_2908	0.36	-0.6
3,263,384	-		Pf1N1B4_2908	0.36	+0.2
3,263,523	+				-0.3
3,263,523	+		Pf1N1B4_2908	0.56	-2.3
3,263,523	+		Pf1N1B4_2908	0.56	-0.5
3,263,524	-		Pf1N1B4_2908	0.56	-1.3
3,263,524	-		Pf1N1B4_2908	0.56	-0.3
3,263,524	-		Pf1N1B4_2908	0.56	-0.3
3,263,524	-		Pf1N1B4_2908	0.56	-1.8
3,263,524	-		Pf1N1B4_2908	0.56	-0.3
3,263,524	-		Pf1N1B4_2908	0.56	-1.6
3,263,541	-		Pf1N1B4_2908	0.58	-0.6
3,263,541	-		Pf1N1B4_2908	0.58	+0.2
3,263,541	-		Pf1N1B4_2908	0.58	-1.1
3,263,589	+		Pf1N1B4_2908	0.65	-0.2
3,263,589	+		Pf1N1B4_2908	0.65	+0.9
3,263,678	+		Pf1N1B4_2908	0.78	-1.1
3,263,678	+		Pf1N1B4_2908	0.78	+1.4
3,263,678	+		Pf1N1B4_2908	0.78	+1.1
3,263,678	+		Pf1N1B4_2908	0.78	-1.2
3,263,680	+		Pf1N1B4_2908	0.78	-0.3
3,263,680	+		Pf1N1B4_2908	0.78	+0.1
3,263,681	-		Pf1N1B4_2908	0.79	-1.6
3,263,708	+		Pf1N1B4_2908	0.83	+1.6
3,263,709	-		Pf1N1B4_2908	0.83	+0.4
3,263,725	+		Pf1N1B4_2908	0.85	+0.7
3,263,725	+		Pf1N1B4_2908	0.85	+1.7
3,263,726	-		Pf1N1B4_2908	0.85	+1.2
3,263,742	+		Pf1N1B4_2908	0.87	+0.2
3,263,742	+		Pf1N1B4_2908	0.87	+2.1
3,263,742	+		Pf1N1B4_2908	0.87	+3.1
3,263,743	-				+2.8
3,263,752	+		Pf1N1B4_2908	0.89	-0.9
3,263,752	+		Pf1N1B4_2908	0.89	+1.2
3,263,753	-		Pf1N1B4_2908	0.89	+0.7
3,263,753	-		Pf1N1B4_2908	0.89	+2.2
3,263,753	-				-0.8
3,263,753	-		Pf1N1B4_2908	0.89	+0.1
3,263,753	-		Pf1N1B4_2908	0.89	+0.1
3,263,781	+				-0.3
3,263,782	-				-0.9
3,263,834	+				+1.4
3,263,835	-				+0.5
3,263,835	-				+1.1
3,263,855	-				+2.4
3,263,864	+				+0.2
3,263,864	+				-1.6
3,263,864	+				+0.4
3,263,864	+				-0.3
3,263,864	+				+1.7
3,263,864	+				+1.2
3,263,864	+				-2.1
3,263,864	+				-1.8
3,263,864	+				-0.3
3,263,864	+				-2.8
3,263,864	+				-0.6
3,263,864	+				-0.3
3,263,864	+				+0.2
3,263,865	-				+2.8
3,263,865	-				-1.1
3,263,865	-				-1.3
3,263,865	-				-2.3
3,263,865	-				-0.9
3,263,865	-				+0.2
3,263,865	-				+3.1
3,263,865	-				-1.7
3,263,865	-				-1.6
3,263,865	-				-0.8
3,263,865	-				-0.8
3,263,865	-				-0.8
3,263,876	-				-0.8
3,263,915	+				-0.8
3,263,915	+				+0.6
3,263,916	-				-0.8
3,263,916	-				+0.0
3,263,916	-				-1.1
3,263,916	-				-0.3
3,263,919	+				+1.2
3,263,919	+				-0.8
3,263,919	+				+1.2
3,263,962	-				-1.9
3,263,962	-				-0.8
3,263,962	-				+3.8
3,264,125	-				+0.9
3,264,228	-				-0.8
3,264,282	+				-0.1
3,264,282	+				+0.8
3,264,282	+				-0.5
3,264,282	+				+2.0
3,264,282	+				-0.1
3,264,282	+				+0.1
3,264,282	+				+1.2
3,264,282	+				-1.1
3,264,283	-				-1.6
3,264,283	-				-1.1
3,264,283	-				-1.0
3,264,283	-				-1.7
3,264,283	-				+1.1
3,264,776	+		Pf1N1B4_2909	0.29	+0.5
3,264,777	-		Pf1N1B4_2909	0.29	-0.3