Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5045

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,589,299	-				+1.5
5,589,299	-				-1.2
5,589,328	+				+0.9
5,589,329	-				+1.9
5,589,450	+				+2.3
5,589,548	-				-1.3
5,589,634	+				-2.2
5,589,634	+				+0.0
5,589,634	+				+1.8
5,589,635	-				-0.4
5,589,635	-				+0.4
5,589,775	+				+0.8
5,589,775	+				-0.8
5,589,979	+				+1.3
5,589,979	+				-1.6
5,589,979	+				+1.5
5,589,982	+				-0.2
5,589,983	-				-2.6
5,589,992	+				+1.3
5,589,993	-				+1.8
5,589,993	-				-0.8
5,590,253	+				-0.8
5,590,278	+				-1.8
5,590,278	+				+0.3
5,590,278	+				-0.3
5,590,278	+				+2.1
5,590,278	+				+0.8
5,590,278	+				-1.2
5,590,278	+				+1.0
5,590,279	-				-0.8
5,590,279	-				+0.2
5,590,279	-				+0.2
5,590,279	-				+0.8
5,590,279	-				+1.3
5,590,279	-				-1.2
5,590,285	+				-0.1
5,590,285	+				+0.2
5,590,285	+				-2.7
5,590,285	+				+0.4
5,590,285	+				+0.1
5,590,285	+				-1.6
5,590,286	-				+1.3
5,590,286	-				+1.8
5,590,376	-		Pf1N1B4_5045	0.17	-1.6
5,590,411	-				-0.2
5,590,672	+		Pf1N1B4_5045	0.66	-1.2
5,590,750	+		Pf1N1B4_5045	0.79	-1.8
5,590,750	+		Pf1N1B4_5045	0.79	-1.8
5,590,750	+		Pf1N1B4_5045	0.79	-0.2
5,590,750	+		Pf1N1B4_5045	0.79	+0.2
5,590,750	+				-0.8
5,590,751	-		Pf1N1B4_5045	0.79	-0.8
5,590,751	-		Pf1N1B4_5045	0.79	-2.6
5,590,751	-		Pf1N1B4_5045	0.79	-1.8
5,590,890	+				+0.8
5,590,890	+				+1.2
5,590,890	+				+0.6
5,590,891	-				-0.0
5,590,891	-				-0.8
5,590,891	-				+2.1
5,590,901	+				-1.6
5,590,901	+				+1.5
5,590,901	+				+0.3
5,590,901	+				-1.0
5,590,901	+				+1.0
5,590,901	+				+1.2
5,590,902	-				+2.2
5,590,904	+				-2.6
5,590,905	-				+0.0
5,590,905	-				-0.5