Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4910

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,439,495	+		Pf1N1B4_4909	0.66	+0.6
5,439,663	+				+1.8
5,439,772	+				-0.2
5,439,773	-				-0.6
5,439,775	-				+0.8
5,439,876	+				+1.8
5,439,982	+				+0.8
5,440,319	-		Pf1N1B4_4910	0.20	+1.0
5,440,327	+		Pf1N1B4_4910	0.21	+0.6
5,440,380	+		Pf1N1B4_4910	0.25	-0.2
5,440,534	+		Pf1N1B4_4910	0.37	-0.5
5,440,534	+		Pf1N1B4_4910	0.37	+2.4
5,440,536	+		Pf1N1B4_4910	0.37	-0.7
5,440,536	+		Pf1N1B4_4910	0.37	+0.0
5,440,537	-				-0.2
5,440,963	+		Pf1N1B4_4910	0.70	+0.2
5,440,963	+		Pf1N1B4_4910	0.70	-1.8
5,440,963	+		Pf1N1B4_4910	0.70	+0.6
5,440,964	-		Pf1N1B4_4910	0.70	-0.2
5,440,964	-		Pf1N1B4_4910	0.70	-0.8
5,441,402	-				-1.2
5,441,402	-				+3.9
5,441,441	-				-2.0
5,441,441	-				-1.8
5,441,441	-				-1.2
5,442,045	+				+1.2
5,442,125	-				-0.8
5,442,125	-				-0.5
5,442,161	-				+0.8
5,442,164	-				-0.6
5,442,303	+		Pf1N1B4_4912	0.31	+0.4
5,442,306	-		Pf1N1B4_4912	0.32	+0.4
5,442,316	-				-0.2