Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4871

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,390,686	-		Pf1N1B4_4869	0.84	+1.3
5,390,927	-				-2.3
5,390,995	+				-0.2
5,390,995	+				+0.3
5,390,995	+				-1.5
5,390,996	-				-0.9
5,390,996	-				-2.5
5,391,271	+		Pf1N1B4_4870	0.45	+2.4
5,391,271	+				+1.2
5,391,393	+		Pf1N1B4_4870	0.71	-1.8
5,391,394	-		Pf1N1B4_4870	0.71	+0.3
5,391,394	-		Pf1N1B4_4870	0.71	-1.8
5,391,487	+				+0.8
5,391,500	+				-0.2
5,391,501	-				-0.2
5,391,596	+				+0.8
5,391,597	-				+0.2
5,391,727	+		Pf1N1B4_4871	0.34	+2.2
5,391,947	+				+1.0
5,391,947	+				-1.2
5,391,947	+				-0.1
5,391,947	+				+0.3
5,391,947	+				+0.3
5,391,948	-				-2.0
5,391,951	+				-1.0
5,392,028	+				-1.2
5,392,028	+				+1.2
5,392,490	+		Pf1N1B4_4872	0.61	+1.1
5,392,555	+		Pf1N1B4_4872	0.69	-0.5
5,392,556	-		Pf1N1B4_4872	0.69	+0.8
5,392,579	+		Pf1N1B4_4872	0.72	+0.9
5,392,580	-		Pf1N1B4_4872	0.72	+1.5
5,392,782	+				+0.1
5,392,782	+				+1.2