Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4748

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,242,901	+		Pf1N1B4_4747	0.69	-1.8
5,242,902	-				-0.8
5,243,047	+		Pf1N1B4_4747	0.83	+1.1
5,243,048	-				+0.2
5,243,220	+				+0.3
5,243,281	+				-1.9
5,243,282	-				-1.8
5,243,282	-				-0.6
5,243,288	-				-0.2
5,243,288	-				+0.4
5,243,288	-				-2.4
5,243,288	-				-0.2
5,243,346	-				+0.2
5,243,346	-				-1.0
5,243,502	-		Pf1N1B4_4748	0.13	-1.5
5,243,772	-		Pf1N1B4_4748	0.36	+0.5
5,243,801	+		Pf1N1B4_4748	0.38	+0.1
5,243,801	+		Pf1N1B4_4748	0.38	-1.5
5,243,801	+		Pf1N1B4_4748	0.38	-1.4
5,243,802	-		Pf1N1B4_4748	0.39	+0.8
5,243,802	-		Pf1N1B4_4748	0.39	-0.5
5,243,802	-		Pf1N1B4_4748	0.39	-0.2
5,243,805	-		Pf1N1B4_4748	0.39	-1.5
5,243,814	+		Pf1N1B4_4748	0.40	-1.5
5,243,815	-		Pf1N1B4_4748	0.40	-1.5
5,243,815	-		Pf1N1B4_4748	0.40	-1.5
5,243,820	+				+1.2
5,243,821	-		Pf1N1B4_4748	0.40	-1.5
5,244,461	+				-2.2
5,244,461	+				-0.2
5,244,462	-				-1.2
5,244,462	-				+0.8
5,244,462	-				+0.9
5,244,462	-				-1.2
5,244,587	+				+0.1
5,244,780	-				-1.0
5,244,780	-				-2.0
5,244,780	-				+0.2
5,244,780	-				-1.2
5,244,807	-				-0.4
5,244,815	+				+1.3
5,244,815	+				-0.8
5,244,816	-				-1.2
5,245,209	-		Pf1N1B4_4749	0.28	+0.8
5,245,212	-		Pf1N1B4_4749	0.28	+0.7