Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4724

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,219,761	+		Pf1N1B4_4723	0.56	+0.6
5,220,085	+		Pf1N1B4_4723	0.75	+0.9
5,220,178	+		Pf1N1B4_4723	0.80	+0.3
5,220,178	+				+1.2
5,220,405	-				+0.6
5,220,550	-				-1.1
5,220,550	-				-2.3
5,220,550	-				-2.3
5,220,550	-				-2.8
5,220,550	-				-4.6
5,220,550	-				-2.5
5,220,637	-				-2.0
5,220,637	-				-3.5
5,220,637	-				-2.5
5,220,898	-				+2.2
5,220,940	-				-0.3
5,220,970	-				-0.7
5,221,137	+				+2.6
5,221,137	+				-0.7
5,221,137	+				-0.2
5,221,157	-				-0.7
5,221,162	+				+1.1
5,221,166	-				-0.3
5,221,178	+				-1.2
5,221,178	+				+1.4
5,221,178	+				+1.0
5,221,178	+				+1.0
5,221,179	-				-2.3
5,221,179	-				-0.2
5,221,222	+				+2.4
5,221,252	+				+0.1
5,221,253	-				-0.4
5,221,265	+				+0.5
5,221,423	+		Pf1N1B4_4725	0.25	+0.8
5,221,423	+		Pf1N1B4_4725	0.25	+1.3
5,221,424	-		Pf1N1B4_4725	0.25	+0.4
5,221,472	+		Pf1N1B4_4725	0.30	+1.7
5,221,472	+		Pf1N1B4_4725	0.30	+1.1
5,221,472	+		Pf1N1B4_4725	0.30	-0.7
5,221,473	-				+1.4
5,221,473	-		Pf1N1B4_4725	0.30	+0.4
5,221,475	-		Pf1N1B4_4725	0.30	+1.4
5,221,572	-		Pf1N1B4_4725	0.40	+1.5