Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4691

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,182,354	+		Pf1N1B4_4689	0.82	-0.5
5,182,396	+		Pf1N1B4_4689	0.86	+0.7
5,182,397	-		Pf1N1B4_4689	0.86	-0.6
5,182,397	-				+2.4
5,182,397	-		Pf1N1B4_4689	0.86	-0.7
5,182,408	+		Pf1N1B4_4689	0.87	-0.7
5,182,601	+				-1.1
5,182,607	+				-2.1
5,182,607	+				-0.7
5,182,607	+				+1.3
5,182,608	-				-1.1
5,182,786	+				+0.9
5,182,917	-		Pf1N1B4_4690	0.35	+0.1
5,183,188	-				-0.1
5,183,264	+		Pf1N1B4_4691	0.14	-0.1
5,183,362	+		Pf1N1B4_4691	0.36	-0.0
5,183,362	+		Pf1N1B4_4691	0.36	-1.5
5,183,363	-		Pf1N1B4_4691	0.36	+0.6
5,183,406	+		Pf1N1B4_4691	0.46	-1.5
5,183,483	+		Pf1N1B4_4691	0.63	+1.5
5,183,484	-		Pf1N1B4_4691	0.64	+1.2
5,183,484	-		Pf1N1B4_4691	0.64	+2.2
5,183,484	-		Pf1N1B4_4691	0.64	-0.6
5,183,696	-				-2.1
5,183,728	+				-0.9
5,183,728	+				+1.6
5,183,837	+				-2.1
5,183,921	+				-0.7
5,183,961	-				+1.1
5,184,005	+				-0.2
5,184,005	+				-0.4
5,184,116	-				-2.1
5,184,455	+				-0.1
5,184,493	+		Pf1N1B4_4692	0.74	+2.7
5,184,493	+		Pf1N1B4_4692	0.74	+1.3
5,184,494	-		Pf1N1B4_4692	0.74	-2.5
5,184,494	-		Pf1N1B4_4692	0.74	-2.0
5,184,533	+		Pf1N1B4_4692	0.81	-1.0
5,184,548	+		Pf1N1B4_4692	0.84	-0.7
5,184,548	+				-0.7
5,184,548	+		Pf1N1B4_4692	0.84	-1.7
5,184,548	+		Pf1N1B4_4692	0.84	+0.5
5,184,548	+				+0.9
5,184,548	+				-0.7
5,184,552	+		Pf1N1B4_4692	0.85	-0.3
5,184,552	+		Pf1N1B4_4692	0.85	+1.9
5,184,572	+		Pf1N1B4_4692	0.89	+0.0