Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4605

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,077,038	+				-2.2
5,077,058	+				-0.2
5,077,136	+				+1.0
5,077,136	+				-0.6
5,077,137	-				-1.2
5,077,137	-				-0.8
5,077,137	-				+0.8
5,077,137	-				-2.6
5,077,138	+				+0.6
5,077,138	+				-2.0
5,077,138	+				-0.8
5,077,139	-				-2.2
5,077,142	+				+0.8
5,077,142	+				-0.1
5,077,142	+				+0.6
5,077,142	+				-1.0
5,077,142	+				-0.3
5,077,143	-				-2.0
5,077,190	+				+0.2
5,077,320	-		Pf1N1B4_4604	0.25	+1.6
5,077,418	+		Pf1N1B4_4604	0.43	-1.0
5,077,418	+		Pf1N1B4_4604	0.43	+0.8
5,077,616	+		Pf1N1B4_4604	0.78	-1.8
5,077,617	-		Pf1N1B4_4604	0.78	+1.2
5,077,726	+				+1.4
5,077,726	+				-2.6
5,077,726	+				+2.8
5,077,727	-				-0.8
5,077,745	+				-1.2
5,077,745	+				-0.3
5,077,745	+				-0.1
5,077,745	+				+2.2
5,077,745	+				-1.0
5,077,745	+				+2.1
5,077,745	+				+0.8
5,077,746	-				+0.4
5,077,746	-				-0.2
5,077,759	+				-1.2
5,077,759	+				-2.6
5,077,759	+				+1.2
5,077,760	-				-2.2
5,077,861	-				-1.2
5,078,315	-				+2.4
5,078,665	+		Pf1N1B4_4605	0.73	-0.1
5,078,665	+				+0.2
5,078,665	+		Pf1N1B4_4605	0.73	+0.2
5,078,668	+		Pf1N1B4_4605	0.74	+0.7
5,078,719	+		Pf1N1B4_4605	0.79	+0.3
5,078,720	-		Pf1N1B4_4605	0.79	+1.1
5,078,890	-				+1.5
5,078,910	+				-0.5
5,078,911	-				+0.2