Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4448

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,906,656	-		Pf1N1B4_4446	0.87	+2.5
4,906,656	-		Pf1N1B4_4446	0.87	-0.4
4,906,737	-				+0.9
4,906,749	-				+0.3
4,906,893	-				+0.6
4,906,893	-				+0.6
4,906,985	+				-0.6
4,907,215	-		Pf1N1B4_4447	0.60	-0.4
4,907,446	-				-2.3
4,907,447	+				-1.9
4,907,447	+				+0.3
4,907,448	-				+0.9
4,907,448	-				-2.3
4,907,448	-				+0.3
4,907,491	+				-0.1
4,907,491	+				+0.1
4,907,491	+				-0.4
4,907,491	+				+0.3
4,907,491	+				+0.5
4,907,492	-				-1.1
4,907,492	-				-0.1
4,907,496	+				-0.4
4,907,497	-				+1.1
4,907,635	+		Pf1N1B4_4448	0.38	-2.3
4,907,635	+		Pf1N1B4_4448	0.38	-0.1
4,907,636	-				-1.5
4,907,636	-		Pf1N1B4_4448	0.38	-2.1
4,907,701	+				+0.9
4,907,719	+		Pf1N1B4_4448	0.61	-1.7
4,907,719	+		Pf1N1B4_4448	0.61	-0.1
4,907,770	+		Pf1N1B4_4448	0.75	-0.5
4,907,863	-				-0.8
4,908,143	-				-0.7
4,908,407	-				-0.7
4,908,475	+		Pf1N1B4_4449	0.28	-0.1
4,908,838	+		Pf1N1B4_4449	0.50	+0.1
4,908,839	-		Pf1N1B4_4449	0.50	-1.5
4,908,839	-		Pf1N1B4_4449	0.50	-0.1
4,908,839	-		Pf1N1B4_4449	0.50	-1.7