Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4295

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,757,863	+				-0.4
4,757,864	-				-1.4
4,757,864	-				-1.7
4,757,864	-				+1.7
4,757,897	+				+0.4
4,757,973	-				+1.4
4,758,281	+				-1.4
4,758,285	+				-1.4
4,758,286	-				+1.2
4,758,339	+				-1.1
4,758,394	+		Pf1N1B4_4294	0.22	-0.4
4,758,394	+		Pf1N1B4_4294	0.22	+1.2
4,758,394	+		Pf1N1B4_4294	0.22	-1.4
4,758,394	+		Pf1N1B4_4294	0.22	-0.1
4,758,395	-		Pf1N1B4_4294	0.22	-1.9
4,758,615	+		Pf1N1B4_4294	0.71	-0.1
4,758,743	-				+2.5
4,758,743	-				+1.9
4,758,870	+		Pf1N1B4_4295	0.62	-2.3
4,758,870	+		Pf1N1B4_4295	0.62	-2.4
4,758,871	-		Pf1N1B4_4295	0.62	-1.9
4,758,891	+		Pf1N1B4_4295	0.72	+1.2
4,758,892	-		Pf1N1B4_4295	0.73	-1.4
4,758,945	+				+2.2
4,758,979	-				-0.5
4,758,979	-				-1.1
4,758,997	-				-0.7
4,759,086	+				-1.9
4,759,116	+				+0.4
4,759,250	-		Pf1N1B4_4296	0.18	+0.6
4,759,486	+		Pf1N1B4_4296	0.41	-0.6
4,759,506	-		Pf1N1B4_4296	0.43	+0.7
4,759,628	+		Pf1N1B4_4296	0.55	-0.7
4,759,629	-		Pf1N1B4_4296	0.55	+1.5
4,759,629	-		Pf1N1B4_4296	0.55	+1.9
4,759,629	-		Pf1N1B4_4296	0.55	+0.5
4,759,712	+		Pf1N1B4_4296	0.63	-0.8
4,759,713	-		Pf1N1B4_4296	0.64	-0.1
4,759,713	-		Pf1N1B4_4296	0.64	+0.3
4,759,715	+		Pf1N1B4_4296	0.64	-2.1
4,759,889	+		Pf1N1B4_4296	0.81	+0.9