Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4264

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,726,592	-				-1.4
4,726,608	-				-1.7
4,726,643	+				-0.3
4,726,643	+				+1.9
4,726,664	+				-1.6
4,727,244	-				-1.4
4,727,262	-				-2.1
4,727,290	-				+0.9
4,727,290	-				-0.6
4,727,430	+				-2.9
4,727,453	+				+1.5
4,727,453	+				+0.3
4,727,583	+				-1.4
4,727,583	+				+0.0
4,727,830	+		Pf1N1B4_4264	0.20	-1.5
4,727,830	+		Pf1N1B4_4264	0.20	-1.1
4,727,830	+		Pf1N1B4_4264	0.20	+0.6
4,727,830	+		Pf1N1B4_4264	0.20	+0.9
4,727,831	-		Pf1N1B4_4264	0.21	-0.7
4,727,831	-		Pf1N1B4_4264	0.21	-0.1
4,728,530	+				-0.1
4,728,530	+		Pf1N1B4_4264	0.79	-0.7
4,728,530	+		Pf1N1B4_4264	0.79	-0.7
4,728,531	-				+0.9
4,728,538	+		Pf1N1B4_4264	0.80	+0.9
4,728,595	+		Pf1N1B4_4264	0.84	-1.1
4,728,758	+				+0.5
4,728,758	+				-2.4
4,728,761	+				-1.1
4,728,842	-				-1.1
4,728,842	-				-0.2
4,728,908	+				-1.1
4,728,908	+				+0.4
4,728,908	+				-1.7
4,729,018	+				+0.2
4,729,157	+		Pf1N1B4_4265	0.29	-0.8
4,729,157	+		Pf1N1B4_4265	0.29	-0.4
4,729,157	+		Pf1N1B4_4265	0.29	+0.9
4,729,158	-		Pf1N1B4_4265	0.30	-1.2
4,729,158	-		Pf1N1B4_4265	0.30	-0.2
4,729,158	-				+0.9
4,729,158	-		Pf1N1B4_4265	0.30	+2.1
4,729,158	-		Pf1N1B4_4265	0.30	+0.9
4,729,158	-				+1.3
4,729,161	+		Pf1N1B4_4265	0.30	-0.7
4,729,161	+		Pf1N1B4_4265	0.30	-1.1
4,729,161	+		Pf1N1B4_4265	0.30	+0.5
4,729,161	+				-1.1
4,729,161	+		Pf1N1B4_4265	0.30	+0.7
4,729,161	+		Pf1N1B4_4265	0.30	-0.1
4,729,161	+		Pf1N1B4_4265	0.30	-1.1
4,729,161	+				+0.3
4,729,161	+		Pf1N1B4_4265	0.30	-0.8
4,729,161	+		Pf1N1B4_4265	0.30	+0.5
4,729,162	-		Pf1N1B4_4265	0.30	-0.7
4,729,162	-		Pf1N1B4_4265	0.30	-1.3
4,729,416	+		Pf1N1B4_4265	0.80	+0.5
4,729,443	+		Pf1N1B4_4265	0.86	-1.1
4,729,443	+		Pf1N1B4_4265	0.86	+0.5
4,729,444	-		Pf1N1B4_4265	0.86	-1.1
4,729,444	-		Pf1N1B4_4265	0.86	-0.7
4,729,595	+				-1.4
4,729,645	-				-1.8
4,729,645	-				-0.1