Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4244

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,702,602	+		Pf1N1B4_4243	0.20	-1.9
4,702,655	+				-0.7
4,702,655	+		Pf1N1B4_4243	0.24	-1.1
4,702,655	+		Pf1N1B4_4243	0.24	-0.1
4,702,655	+		Pf1N1B4_4243	0.24	+0.1
4,702,656	-		Pf1N1B4_4243	0.24	-1.4
4,702,656	-		Pf1N1B4_4243	0.24	-1.1
4,702,659	+				-0.1
4,702,660	-				-1.4
4,702,701	+				+2.7
4,702,832	+		Pf1N1B4_4243	0.40	+0.2
4,702,873	+		Pf1N1B4_4243	0.43	-0.4
4,702,873	+		Pf1N1B4_4243	0.43	-0.6
4,702,874	-		Pf1N1B4_4243	0.43	-1.6
4,703,678	+		Pf1N1B4_4244	0.10	-0.5
4,703,678	+		Pf1N1B4_4244	0.10	+1.6
4,703,741	-		Pf1N1B4_4244	0.15	-2.7
4,703,857	+		Pf1N1B4_4244	0.23	+1.7
4,703,857	+		Pf1N1B4_4244	0.23	-1.9
4,703,857	+		Pf1N1B4_4244	0.23	+0.6
4,703,857	+				+0.9
4,703,877	-		Pf1N1B4_4244	0.24	-1.7
4,703,888	+		Pf1N1B4_4244	0.25	+2.7
4,703,889	-		Pf1N1B4_4244	0.25	-0.7
4,704,005	-		Pf1N1B4_4244	0.34	+2.2
4,704,054	+		Pf1N1B4_4244	0.37	-1.9
4,704,055	-		Pf1N1B4_4244	0.37	+0.2
4,704,115	-		Pf1N1B4_4244	0.42	-0.1
4,704,118	+		Pf1N1B4_4244	0.42	-1.1
4,704,118	+		Pf1N1B4_4244	0.42	+1.4
4,704,118	+		Pf1N1B4_4244	0.42	+0.6
4,704,119	-		Pf1N1B4_4244	0.42	-0.1
4,704,119	-		Pf1N1B4_4244	0.42	-2.7
4,704,214	-		Pf1N1B4_4244	0.49	-2.6
4,704,503	-		Pf1N1B4_4244	0.69	+0.5
4,704,526	-		Pf1N1B4_4244	0.71	+0.0
4,704,526	-		Pf1N1B4_4244	0.71	-1.3
4,705,021	+				-1.3
4,705,022	-				-0.9
4,705,022	-				-1.9
4,705,022	-				+2.5
4,705,133	-				-0.1
4,705,133	-		Pf1N1B4_4245	0.14	+0.7
4,705,220	-		Pf1N1B4_4245	0.21	-0.7
4,705,320	+		Pf1N1B4_4245	0.28	-2.9
4,705,364	-		Pf1N1B4_4245	0.31	-0.1
4,705,376	-		Pf1N1B4_4245	0.32	+2.5
4,705,786	+		Pf1N1B4_4245	0.62	+0.9
4,705,787	-		Pf1N1B4_4245	0.62	+0.4
4,705,798	+		Pf1N1B4_4245	0.63	-1.9
4,705,798	+		Pf1N1B4_4245	0.63	-1.8
4,705,826	-		Pf1N1B4_4245	0.65	-1.1
4,705,826	-		Pf1N1B4_4245	0.65	-0.9
4,705,849	+		Pf1N1B4_4245	0.66	-0.7
4,705,849	+		Pf1N1B4_4245	0.66	-2.1
4,705,849	+		Pf1N1B4_4245	0.66	-2.3
4,705,849	+		Pf1N1B4_4245	0.66	-2.4
4,705,850	-		Pf1N1B4_4245	0.67	-1.7
4,705,850	-		Pf1N1B4_4245	0.67	+1.3
4,705,867	+		Pf1N1B4_4245	0.68	-1.1
4,705,867	+				-0.1
4,705,868	-		Pf1N1B4_4245	0.68	+0.2