Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4089

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,535,975	-		Pf1N1B4_4087	0.74	-0.1
4,536,061	-				+1.2
4,536,061	-				+0.2
4,536,074	-				+1.6
4,536,074	-				+1.6
4,536,139	-				+2.9
4,536,200	+				-1.5
4,536,490	-		Pf1N1B4_4088	0.79	-1.1
4,536,492	-		Pf1N1B4_4088	0.80	+1.8
4,536,492	-		Pf1N1B4_4088	0.80	-0.1
4,536,492	-				+1.3
4,536,492	-		Pf1N1B4_4088	0.80	+0.6
4,536,557	+				-1.9
4,536,731	-				-0.5
4,536,791	+				-0.9
4,536,791	+				+0.3
4,536,792	-				+0.2
4,536,817	+				-0.5
4,536,853	-				-2.8
4,536,969	+				+1.3
4,536,970	-				-2.1
4,536,977	-				-1.4
4,537,171	+		Pf1N1B4_4089	0.57	-0.7
4,537,171	+		Pf1N1B4_4089	0.57	-2.4
4,537,172	-		Pf1N1B4_4089	0.57	+0.9
4,537,184	-		Pf1N1B4_4089	0.61	-0.1
4,537,276	-		Pf1N1B4_4089	0.86	-0.0
4,537,324	+				-1.1
4,537,324	+				+1.4
4,537,325	-				-0.7
4,537,325	-				+1.7
4,537,395	-				+0.7
4,537,406	+				-1.4
4,537,464	+				-0.7
4,537,465	-				+0.3
4,537,466	+				-1.7
4,537,466	+				+2.2
4,537,466	+				+1.3
4,537,467	-				-0.7
4,537,467	-				-2.1
4,537,508	-				-1.3
4,537,517	-				+1.9
4,537,570	+				-2.2
4,537,571	-				-0.4
4,537,571	-				+0.3
4,537,571	-				-0.3
4,537,571	-				-1.4
4,537,571	-				+0.6
4,537,571	-				-0.7
4,537,638	+				+0.9
4,537,668	+				+0.9
4,537,668	+				-0.1
4,537,688	-				+0.8
4,537,688	-				-1.4
4,537,688	-				-0.1
4,537,688	-				-0.1
4,537,688	-				-1.1
4,537,688	-				+1.4
4,537,688	-				-1.9
4,537,688	-				+0.7
4,537,768	-				+0.5
4,537,768	-				+0.9
4,537,818	+				+1.3
4,537,820	+				+1.5
4,537,820	+				-0.3
4,537,820	+				-0.1
4,537,821	-				-0.2
4,537,951	-				+0.3
4,537,978	+				-1.1
4,537,979	-				+0.9
4,537,979	-				+0.4
4,537,979	-				-1.5
4,537,979	-				+2.5
4,537,979	-				+0.7
4,538,206	+		Pf1N1B4_4090	0.13	-0.7
4,538,206	+		Pf1N1B4_4090	0.13	-0.2
4,538,206	+		Pf1N1B4_4090	0.13	-0.1
4,538,207	-		Pf1N1B4_4090	0.14	+1.9
4,538,207	-		Pf1N1B4_4090	0.14	+0.9
4,538,290	+		Pf1N1B4_4090	0.18	-0.1
4,538,290	+		Pf1N1B4_4090	0.18	-1.7
4,538,291	-		Pf1N1B4_4090	0.18	+0.9