Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4001

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,449,103	-		Pf1N1B4_4000	0.76	+2.7
4,449,124	-		Pf1N1B4_4000	0.77	-0.3
4,449,124	-		Pf1N1B4_4000	0.77	+0.1
4,449,124	-		Pf1N1B4_4000	0.77	-1.4
4,449,240	+		Pf1N1B4_4000	0.85	-0.6
4,449,240	+		Pf1N1B4_4000	0.85	+3.0
4,449,241	-		Pf1N1B4_4000	0.85	+0.8
4,449,241	-		Pf1N1B4_4000	0.85	-1.6
4,449,241	-				-0.0
4,449,241	-		Pf1N1B4_4000	0.85	-2.5
4,449,279	-		Pf1N1B4_4000	0.88	-1.6
4,449,282	+		Pf1N1B4_4000	0.88	-1.5
4,449,282	+		Pf1N1B4_4000	0.88	-0.4
4,449,453	+				-1.6
4,449,453	+				+2.7
4,449,453	+				+0.6
4,449,485	+				+0.5
4,449,485	+				+0.2
4,449,485	+				-0.3
4,449,486	-				-1.0
4,449,486	-				-1.4
4,449,526	+				+0.0
4,449,527	-				+0.6
4,449,831	+		Pf1N1B4_4001	0.30	-0.6
4,449,831	+		Pf1N1B4_4001	0.30	-2.0
4,450,329	+		Pf1N1B4_4001	0.71	-0.2
4,450,329	+		Pf1N1B4_4001	0.71	-1.6
4,450,330	-		Pf1N1B4_4001	0.71	-2.0
4,450,584	+				-1.9
4,450,584	+				-1.6
4,450,584	+				+1.3
4,450,584	+				-0.0
4,450,585	-				+0.7
4,450,585	-				-1.0
4,450,585	-				-0.6
4,450,585	-				-1.6
4,450,585	-				+0.4
4,450,585	-				+0.5
4,451,233	-		Pf1N1B4_4002	0.23	+0.1
4,451,367	+		Pf1N1B4_4002	0.32	+1.4
4,451,367	+		Pf1N1B4_4002	0.32	-1.4
4,451,368	-				-1.0
4,451,368	-		Pf1N1B4_4002	0.32	-1.4
4,451,481	+		Pf1N1B4_4002	0.40	-0.1
4,451,481	+		Pf1N1B4_4002	0.40	+1.6
4,451,482	-		Pf1N1B4_4002	0.40	-0.3