Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3973

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,413,489	+		Pf1N1B4_3972	0.16	-2.0
4,413,490	-		Pf1N1B4_3972	0.16	-1.8
4,413,495	+				-1.4
4,413,495	+		Pf1N1B4_3972	0.17	-2.4
4,413,495	+				-1.6
4,413,496	-		Pf1N1B4_3972	0.17	-1.8
4,413,496	-		Pf1N1B4_3972	0.17	-0.0
4,413,727	-		Pf1N1B4_3972	0.46	+0.5
4,413,727	-		Pf1N1B4_3972	0.46	+1.0
4,414,079	+				-1.4
4,414,287	+		Pf1N1B4_3973	0.14	+1.0
4,414,287	+		Pf1N1B4_3973	0.14	-1.5
4,414,575	+				+1.0
4,414,749	+		Pf1N1B4_3973	0.67	-0.8
4,414,749	+		Pf1N1B4_3973	0.67	-1.4
4,414,749	+		Pf1N1B4_3973	0.67	-1.3
4,414,749	+		Pf1N1B4_3973	0.67	-0.0
4,414,828	-		Pf1N1B4_3973	0.76	-1.4
4,414,833	+		Pf1N1B4_3973	0.77	-2.5
4,414,834	-		Pf1N1B4_3973	0.77	-1.9
4,414,886	-				-1.6
4,414,886	-				+1.0
4,414,886	-				-0.6
4,414,963	-				-0.6
4,414,963	-				+0.4
4,414,963	-				-1.6
4,415,026	+				+0.7
4,415,026	+				+0.3
4,415,026	+				-3.0
4,415,172	-		Pf1N1B4_3974	0.14	-0.2
4,415,725	+				-0.0
4,415,726	-		Pf1N1B4_3974	0.68	-2.0
4,415,746	-				+2.0