Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3939

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,374,690	+				-0.4
4,374,690	+				+1.2
4,374,699	+				+1.0
4,374,727	+				+1.4
4,374,734	+				-1.6
4,374,734	+				-1.4
4,374,734	+				-0.0
4,375,375	+		Pf1N1B4_3938	0.87	+0.4
4,375,375	+		Pf1N1B4_3938	0.87	-0.3
4,375,375	+		Pf1N1B4_3938	0.87	-0.0
4,375,376	-		Pf1N1B4_3938	0.87	+1.5
4,375,376	-		Pf1N1B4_3938	0.87	+0.7
4,375,376	-		Pf1N1B4_3938	0.87	-0.5
4,375,376	-				-1.4
4,375,478	+				+1.2
4,375,637	-		Pf1N1B4_3939	0.51	-2.0
4,375,640	-				+0.5
4,375,697	+		Pf1N1B4_3939	0.86	-2.7
4,375,697	+		Pf1N1B4_3939	0.86	-1.0
4,375,697	+		Pf1N1B4_3939	0.86	-0.5
4,375,698	-		Pf1N1B4_3939	0.87	-1.4
4,375,698	-		Pf1N1B4_3939	0.87	-1.6
4,375,698	-				+2.0
4,375,698	-		Pf1N1B4_3939	0.87	-0.0
4,375,698	-				-1.4
4,375,698	-		Pf1N1B4_3939	0.87	-0.6
4,375,698	-				-1.4
4,375,766	+				-2.4
4,375,790	+				-0.7
4,375,790	+				-1.0
4,375,790	+				+1.0
4,375,868	+				-1.0
4,375,891	+				-0.0
4,376,099	+		Pf1N1B4_3940	0.28	-0.9
4,376,672	+				+2.0
4,376,673	-				+0.6