Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3668

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,071,471	+				-0.9
4,071,526	+				-2.2
4,071,526	+				-1.7
4,071,578	+				-0.5
4,071,579	-				+1.1
4,071,579	-				+1.3
4,071,590	-				-1.5
4,071,644	-				-0.5
4,071,662	+				-0.5
4,071,675	-				-1.4
4,071,676	+				-1.7
4,071,676	+				-0.9
4,071,677	-				-2.1
4,071,677	-				-2.1
4,071,677	-				-2.5
4,071,682	+				-1.5
4,071,683	-				+0.8
4,071,683	-				-2.2
4,071,683	-				-2.1
4,071,697	+				-1.7
4,071,742	+		Pf1N1B4_3667	0.13	-2.7
4,071,742	+		Pf1N1B4_3667	0.13	-1.5
4,071,835	+		Pf1N1B4_3667	0.24	-1.9
4,071,835	+		Pf1N1B4_3667	0.24	-2.3
4,071,835	+		Pf1N1B4_3667	0.24	-2.5
4,071,836	-		Pf1N1B4_3667	0.25	-1.9
4,071,836	-		Pf1N1B4_3667	0.25	-4.5
4,071,836	-		Pf1N1B4_3667	0.25	-1.3
4,071,899	-		Pf1N1B4_3667	0.33	-2.3
4,071,899	-		Pf1N1B4_3667	0.33	-1.9
4,071,920	-		Pf1N1B4_3667	0.35	-0.5
4,071,920	-		Pf1N1B4_3667	0.35	-3.1
4,071,920	-		Pf1N1B4_3667	0.35	-2.7
4,072,086	+		Pf1N1B4_3667	0.56	-2.2
4,072,087	-		Pf1N1B4_3667	0.56	+0.1
4,072,147	+		Pf1N1B4_3667	0.64	-1.9
4,072,147	+		Pf1N1B4_3667	0.64	-1.2
4,072,147	+		Pf1N1B4_3667	0.64	-3.1
4,072,147	+		Pf1N1B4_3667	0.64	-3.0
4,072,147	+		Pf1N1B4_3667	0.64	-2.3
4,072,196	-		Pf1N1B4_3667	0.70	-0.5
4,072,207	+		Pf1N1B4_3667	0.72	-1.9
4,072,240	+		Pf1N1B4_3667	0.76	-3.0
4,072,240	+		Pf1N1B4_3667	0.76	-0.5
4,072,391	+				-2.2
4,072,420	+				-1.1
4,072,424	+				-2.2
4,072,424	+				-2.3
4,072,424	+				-2.1
4,072,425	-				-0.5
4,072,425	-				-1.5
4,072,610	+		Pf1N1B4_3668	0.14	-0.9
4,072,610	+		Pf1N1B4_3668	0.14	-1.5
4,072,610	+		Pf1N1B4_3668	0.14	-2.7
4,072,611	-		Pf1N1B4_3668	0.14	+0.1
4,072,625	+		Pf1N1B4_3668	0.16	-1.8
4,072,626	-		Pf1N1B4_3668	0.16	-2.3
4,072,626	-		Pf1N1B4_3668	0.16	-0.5
4,072,709	+		Pf1N1B4_3668	0.22	-1.2
4,072,709	+		Pf1N1B4_3668	0.22	-3.1
4,072,709	+		Pf1N1B4_3668	0.22	-0.2
4,072,753	-		Pf1N1B4_3668	0.25	-2.8
4,072,919	+		Pf1N1B4_3668	0.38	-1.5
4,072,947	-		Pf1N1B4_3668	0.40	-0.6
4,072,947	-		Pf1N1B4_3668	0.40	-1.7
4,072,947	-				-1.2
4,072,947	-		Pf1N1B4_3668	0.40	-1.5
4,072,995	-		Pf1N1B4_3668	0.44	-2.2
4,073,066	+		Pf1N1B4_3668	0.49	-4.7
4,073,066	+		Pf1N1B4_3668	0.49	-2.5
4,073,066	+		Pf1N1B4_3668	0.49	-1.2
4,073,067	-		Pf1N1B4_3668	0.50	-4.1
4,073,067	-		Pf1N1B4_3668	0.50	-2.9
4,073,354	+		Pf1N1B4_3668	0.72	-0.5
4,073,354	+		Pf1N1B4_3668	0.72	-2.2
4,073,354	+		Pf1N1B4_3668	0.72	+0.1
4,073,354	+		Pf1N1B4_3668	0.72	-3.1
4,073,354	+		Pf1N1B4_3668	0.72	-1.2
4,073,355	-		Pf1N1B4_3668	0.72	-0.9
4,073,355	-		Pf1N1B4_3668	0.72	-2.1
4,073,358	-		Pf1N1B4_3668	0.72	-1.9
4,073,358	-		Pf1N1B4_3668	0.72	-1.2
4,073,372	+		Pf1N1B4_3668	0.73	-2.7
4,073,372	+		Pf1N1B4_3668	0.73	+0.1
4,073,393	+		Pf1N1B4_3668	0.75	-2.8
4,073,393	+		Pf1N1B4_3668	0.75	-1.2
4,073,459	+		Pf1N1B4_3668	0.80	-0.5
4,073,459	+		Pf1N1B4_3668	0.80	-2.9
4,073,633	+				-2.6
4,073,675	-				-2.2
4,073,725	+				+1.1
4,073,725	+				-2.5
4,073,725	+				-1.5
4,073,725	+				-1.3
4,073,725	+				-1.2
4,073,725	+				-2.5
4,073,726	-				-2.9
4,073,726	-				-2.0
4,073,726	-				-1.1
4,073,726	-				-3.0
4,073,832	+				-0.9
4,073,843	+				-2.2
4,073,856	+				+0.1
4,073,857	-				+0.5
4,073,871	+				-1.8
4,073,871	+				+0.4
4,073,871	+				-1.5
4,073,872	-				+3.0
4,073,931	+				-1.5
4,073,931	+				-1.6
4,074,008	+		Pf1N1B4_3669	0.17	-0.2
4,074,129	+				-0.5
4,074,239	+		Pf1N1B4_3669	0.80	-1.7
4,074,304	+				-0.9
4,074,442	+				+0.1
4,074,443	-				-0.9