Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3484

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,889,712	+		Pf1N1B4_3482	0.81	-1.5
3,889,799	+				-0.1
3,889,799	+				+0.1
3,889,799	+				-1.9
3,889,799	+				-1.0
3,889,799	+				-0.7
3,889,799	+				-1.0
3,889,799	+				+0.5
3,889,800	-				-0.5
3,889,814	+				-1.7
3,889,814	+				-1.3
3,889,814	+				-0.2
3,889,814	+				-1.5
3,889,814	+				-1.9
3,889,823	+				-1.2
3,889,823	+				-0.1
3,889,823	+				-0.5
3,889,824	-				-0.6
3,889,824	-				+1.1
3,889,835	+				-1.0
3,889,835	+				+0.9
3,889,836	-				-2.0
3,889,980	+				+3.2
3,889,980	+				+2.5
3,889,980	+				+2.0
3,890,017	+				-0.3
3,890,129	+		Pf1N1B4_3483	0.16	-2.0
3,890,309	+		Pf1N1B4_3483	0.43	-0.9
3,890,309	+		Pf1N1B4_3483	0.43	-1.5
3,890,309	+		Pf1N1B4_3483	0.43	-1.2
3,890,309	+		Pf1N1B4_3483	0.43	-1.5
3,890,309	+		Pf1N1B4_3483	0.43	-0.2
3,890,309	+		Pf1N1B4_3483	0.43	-1.5
3,890,309	+		Pf1N1B4_3483	0.43	-0.5
3,890,310	-		Pf1N1B4_3483	0.43	-1.9
3,890,475	-		Pf1N1B4_3483	0.67	+0.9
3,890,495	+		Pf1N1B4_3483	0.70	-1.9
3,890,495	+		Pf1N1B4_3483	0.70	+0.1
3,890,496	-		Pf1N1B4_3483	0.71	-0.9
3,890,496	-		Pf1N1B4_3483	0.71	-1.2
3,890,938	+		Pf1N1B4_3484	0.18	-0.9
3,890,938	+		Pf1N1B4_3484	0.18	+2.5
3,890,939	-		Pf1N1B4_3484	0.18	+2.9
3,890,944	+		Pf1N1B4_3484	0.19	+2.2
3,890,944	+		Pf1N1B4_3484	0.19	+2.3
3,890,944	+		Pf1N1B4_3484	0.19	+0.5
3,890,944	+		Pf1N1B4_3484	0.19	-0.9
3,890,944	+		Pf1N1B4_3484	0.19	+0.7
3,890,944	+		Pf1N1B4_3484	0.19	+0.4
3,890,944	+		Pf1N1B4_3484	0.19	-0.2
3,890,944	+		Pf1N1B4_3484	0.19	+3.3
3,890,944	+		Pf1N1B4_3484	0.19	+0.1
3,890,945	-		Pf1N1B4_3484	0.19	-0.9
3,891,004	+		Pf1N1B4_3484	0.23	-0.1
3,891,004	+		Pf1N1B4_3484	0.23	+3.1
3,891,079	+		Pf1N1B4_3484	0.29	+2.5
3,891,079	+		Pf1N1B4_3484	0.29	+1.0
3,891,079	+		Pf1N1B4_3484	0.29	-1.5
3,891,709	+		Pf1N1B4_3484	0.76	+2.9
3,891,709	+		Pf1N1B4_3484	0.76	+3.4
3,891,709	+		Pf1N1B4_3484	0.76	+3.1
3,891,709	+		Pf1N1B4_3484	0.76	+3.6
3,891,709	+		Pf1N1B4_3484	0.76	+1.8
3,891,964	+				+4.3
3,891,964	+				+2.8
3,892,163	+				+1.1
3,892,178	-				+1.5
3,892,194	+				+1.9
3,892,235	+				+1.1
3,892,277	+				+0.4
3,892,277	+				+1.1
3,892,277	+				+1.4
3,892,278	-				+0.1
3,892,371	+				-0.1
3,892,459	+				-1.7
3,892,474	+				+1.4
3,892,474	+				+0.1
3,892,474	+				+1.6
3,892,475	+				+1.1
3,892,475	-				+1.4
3,892,488	+				-0.6
3,892,537	-				+1.1
3,892,537	-				-0.7
3,892,627	+		Pf1N1B4_3485	0.28	+1.9
3,892,627	+		Pf1N1B4_3485	0.28	+1.7
3,892,630	+				-0.5
3,892,634	+				+1.9
3,892,634	+		Pf1N1B4_3485	0.30	+0.9
3,892,682	-		Pf1N1B4_3485	0.44	-0.5
3,892,682	-		Pf1N1B4_3485	0.44	-1.2
3,892,682	-		Pf1N1B4_3485	0.44	-0.5