Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3417

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,806,335	+		Pf1N1B4_3416	0.44	+0.7
3,806,336	-		Pf1N1B4_3416	0.44	-0.1
3,806,641	+		Pf1N1B4_3416	0.73	+1.8
3,806,641	+		Pf1N1B4_3416	0.73	-1.9
3,806,642	-		Pf1N1B4_3416	0.73	-0.7
3,806,707	-		Pf1N1B4_3416	0.79	+0.1
3,806,707	-		Pf1N1B4_3416	0.79	+0.0
3,806,784	+		Pf1N1B4_3416	0.86	+0.0
3,806,857	+				-1.7
3,806,857	+				+1.1
3,806,858	-				-1.3
3,806,858	-				-0.9
3,806,858	-				+0.1
3,806,983	+				-1.7
3,806,984	-				-0.5
3,806,984	-				+0.8
3,806,984	-				+0.9
3,806,999	+				-2.3
3,807,000	-				-1.3
3,807,026	+				+1.8
3,807,026	+				+0.8
3,807,027	-				+1.7
3,807,027	-				-0.9
3,807,027	-				+1.6
3,807,085	+				+1.0
3,807,085	+				-1.2
3,807,097	+				-2.3
3,807,098	-				-1.5
3,807,098	-				-0.3
3,807,189	+				+0.3
3,807,307	+				-0.5
3,807,308	-				+2.7
3,807,749	-				-0.6
3,807,894	+				-1.2
3,807,894	+				-1.9
3,807,894	+				+0.8
3,807,903	+				-0.3
3,807,903	+				-1.6
3,807,903	+				+0.4
3,807,903	+				-1.7
3,807,904	-				+1.5
3,807,904	-				-0.3
3,807,987	+				+0.1
3,808,065	+				+0.1
3,808,103	+				-1.2
3,808,104	-				-0.2
3,808,197	+		Pf1N1B4_3419	0.14	+0.8
3,808,335	+		Pf1N1B4_3419	0.20	-0.5
3,808,335	+		Pf1N1B4_3419	0.20	-2.5
3,808,335	+				+2.1
3,808,335	+		Pf1N1B4_3419	0.20	+1.8
3,808,335	+		Pf1N1B4_3419	0.20	-2.0
3,808,335	+		Pf1N1B4_3419	0.20	-1.2
3,808,336	-		Pf1N1B4_3419	0.20	-0.8
3,808,336	-		Pf1N1B4_3419	0.20	-0.6
3,808,336	-		Pf1N1B4_3419	0.20	-1.2
3,808,336	-		Pf1N1B4_3419	0.20	-1.5
3,808,336	-		Pf1N1B4_3419	0.20	+0.5
3,808,394	+		Pf1N1B4_3419	0.22	+0.1
3,808,395	-		Pf1N1B4_3419	0.22	-0.2
3,808,496	+		Pf1N1B4_3419	0.27	+0.3
3,808,496	+		Pf1N1B4_3419	0.27	-1.8
3,808,496	+		Pf1N1B4_3419	0.27	-0.3
3,808,496	+		Pf1N1B4_3419	0.27	-0.3
3,808,497	-		Pf1N1B4_3419	0.27	+0.0
3,808,497	-		Pf1N1B4_3419	0.27	+2.9
3,808,523	+		Pf1N1B4_3419	0.28	-1.9
3,808,523	+		Pf1N1B4_3419	0.28	+0.3
3,808,565	+		Pf1N1B4_3419	0.30	-1.2
3,808,577	+		Pf1N1B4_3419	0.30	+0.4