Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3303

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,691,284	-				-1.8
3,691,284	-				+2.5
3,691,284	-				-0.4
3,691,392	+				+0.9
3,691,392	+				+1.5
3,691,393	-				-0.7
3,691,470	+				+1.8
3,691,470	+		Pf1N1B4_3302	0.18	+1.2
3,691,471	-		Pf1N1B4_3302	0.18	+1.8
3,691,471	-		Pf1N1B4_3302	0.18	+1.8
3,691,471	-		Pf1N1B4_3302	0.18	-2.2
3,691,605	+		Pf1N1B4_3302	0.39	+0.4
3,691,605	+		Pf1N1B4_3302	0.39	-0.6
3,691,606	-		Pf1N1B4_3302	0.39	-2.7
3,691,606	-		Pf1N1B4_3302	0.39	-0.8
3,691,606	-		Pf1N1B4_3302	0.39	+2.2
3,691,606	-		Pf1N1B4_3302	0.39	+0.1
3,691,606	-				-0.8
3,691,606	-		Pf1N1B4_3302	0.39	-1.1
3,691,606	-		Pf1N1B4_3302	0.39	+2.8
3,691,629	+		Pf1N1B4_3302	0.43	-2.8
3,691,749	+		Pf1N1B4_3302	0.61	+1.2
3,691,750	-		Pf1N1B4_3302	0.62	+1.8
3,691,773	+		Pf1N1B4_3302	0.65	-0.4
3,691,805	+		Pf1N1B4_3302	0.70	-1.1
3,691,805	+		Pf1N1B4_3302	0.70	-0.8
3,691,805	+				+0.9
3,691,805	+		Pf1N1B4_3302	0.70	+0.2
3,691,805	+		Pf1N1B4_3302	0.70	+2.8
3,691,806	-		Pf1N1B4_3302	0.70	+0.2
3,691,806	-		Pf1N1B4_3302	0.70	-0.4
3,691,806	-		Pf1N1B4_3302	0.70	-1.9
3,691,806	-		Pf1N1B4_3302	0.70	-0.9
3,691,813	-		Pf1N1B4_3302	0.71	-2.4
3,691,840	-		Pf1N1B4_3302	0.76	+0.5
3,692,195	+		Pf1N1B4_3303	0.26	-1.8
3,692,207	+		Pf1N1B4_3303	0.27	+0.2
3,692,208	-		Pf1N1B4_3303	0.28	-1.8
3,692,208	-		Pf1N1B4_3303	0.28	-2.6
3,692,208	-				+1.2
3,692,322	+		Pf1N1B4_3303	0.43	-1.8
3,692,747	+				+1.1
3,692,837	+		Pf1N1B4_3304	0.12	+1.0
3,692,837	+		Pf1N1B4_3304	0.12	-0.4
3,692,838	-				+1.2
3,692,838	-		Pf1N1B4_3304	0.12	+1.0
3,692,838	-		Pf1N1B4_3304	0.12	-0.4
3,692,855	+				-0.4
3,692,856	-		Pf1N1B4_3304	0.14	-1.4
3,692,856	-		Pf1N1B4_3304	0.14	-0.6
3,693,370	-		Pf1N1B4_3304	0.79	-0.1
3,693,388	+		Pf1N1B4_3304	0.81	-0.2
3,693,389	-		Pf1N1B4_3304	0.81	+0.2
3,693,391	+		Pf1N1B4_3304	0.82	+0.3
3,693,392	-				-0.8
3,693,485	-				+2.5
3,693,497	+				-2.2
3,693,498	-				+1.6
3,693,498	-				+1.3
3,693,498	-				+0.2
3,693,550	+				+2.0
3,693,550	+				+1.0
3,693,550	+				+0.2
3,693,551	-				+0.4
3,693,704	+		Pf1N1B4_3305	0.21	+1.0
3,693,704	+		Pf1N1B4_3305	0.21	-1.6