Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3264

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,653,912	+		Pf1N1B4_3263	0.53	-2.1
3,653,933	+		Pf1N1B4_3263	0.55	+0.5
3,653,962	+		Pf1N1B4_3263	0.57	+0.1
3,654,072	+		Pf1N1B4_3263	0.64	-1.3
3,654,072	+		Pf1N1B4_3263	0.64	-0.3
3,654,072	+		Pf1N1B4_3263	0.64	-0.3
3,654,072	+		Pf1N1B4_3263	0.64	+0.3
3,654,073	-		Pf1N1B4_3263	0.65	+0.9
3,654,073	-		Pf1N1B4_3263	0.65	+2.1
3,654,073	-		Pf1N1B4_3263	0.65	-0.3
3,654,073	-		Pf1N1B4_3263	0.65	-0.3
3,654,129	+		Pf1N1B4_3263	0.69	+3.3
3,654,129	+		Pf1N1B4_3263	0.69	-1.6
3,654,130	-		Pf1N1B4_3263	0.69	+0.7
3,654,130	-		Pf1N1B4_3263	0.69	-0.7
3,654,357	+		Pf1N1B4_3263	0.85	+0.3
3,654,357	+		Pf1N1B4_3263	0.85	-0.3
3,654,358	-		Pf1N1B4_3263	0.85	+2.4
3,654,570	+				+0.8
3,654,669	-				+4.2
3,654,669	-				-0.1
3,654,699	-				+1.7
3,654,703	+				-2.4
3,654,862	+				+5.4
3,654,863	-				+4.5
3,654,949	+		Pf1N1B4_3264	0.17	+7.5
3,654,951	+		Pf1N1B4_3264	0.17	+3.8
3,654,951	+		Pf1N1B4_3264	0.17	+4.8
3,654,952	-		Pf1N1B4_3264	0.17	+5.8
3,655,043	+		Pf1N1B4_3264	0.24	+7.0
3,655,384	+		Pf1N1B4_3264	0.52	+4.9
3,655,384	+				+7.0
3,655,384	+		Pf1N1B4_3264	0.52	+7.0
3,655,385	-		Pf1N1B4_3264	0.52	+6.0
3,655,583	-		Pf1N1B4_3264	0.69	+7.3
3,655,906	+				+5.5
3,655,955	-				+1.6
3,656,020	+				-1.3
3,656,021	-				-0.3
3,656,021	-				+1.8
3,656,021	-				-0.0
3,656,023	+				-0.3
3,656,024	-				-0.7
3,656,139	-		Pf1N1B4_3265	0.13	-1.3
3,656,139	-		Pf1N1B4_3265	0.13	+0.1
3,656,294	-		Pf1N1B4_3265	0.30	+2.1
3,656,294	-		Pf1N1B4_3265	0.30	+2.0
3,656,294	-		Pf1N1B4_3265	0.30	-0.1
3,656,351	-		Pf1N1B4_3265	0.36	+0.3
3,656,351	-		Pf1N1B4_3265	0.36	-1.6
3,656,530	+		Pf1N1B4_3265	0.55	-0.5
3,656,612	-		Pf1N1B4_3265	0.64	+0.3
3,656,612	-		Pf1N1B4_3265	0.64	-0.2
3,656,892	-				+0.3