Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2626

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,963,844	+		Pf1N1B4_2624	0.35	+1.4
2,963,844	+		Pf1N1B4_2624	0.35	-1.7
2,963,844	+		Pf1N1B4_2624	0.35	+0.7
2,963,844	+		Pf1N1B4_2624	0.35	-1.4
2,963,844	+		Pf1N1B4_2624	0.35	+1.0
2,963,844	+		Pf1N1B4_2624	0.35	+0.7
2,963,844	+		Pf1N1B4_2624	0.35	-1.0
2,963,845	-		Pf1N1B4_2624	0.35	-1.2
2,963,845	-		Pf1N1B4_2624	0.35	+0.2
2,963,845	-		Pf1N1B4_2624	0.35	-0.4
2,963,845	-		Pf1N1B4_2624	0.35	-0.9
2,963,845	-		Pf1N1B4_2624	0.35	-1.4
2,963,845	-		Pf1N1B4_2624	0.35	-1.2
2,963,845	-		Pf1N1B4_2624	0.35	+0.1
2,964,020	+		Pf1N1B4_2624	0.53	+0.0
2,964,021	-		Pf1N1B4_2624	0.53	+0.2
2,964,021	-		Pf1N1B4_2624	0.53	-1.7
2,964,021	-		Pf1N1B4_2624	0.53	+1.8
2,964,118	-		Pf1N1B4_2624	0.63	+0.9
2,964,494	+				+0.8
2,964,495	-				+0.4
2,964,495	-				-0.7
2,964,542	+				-0.9
2,964,643	+		Pf1N1B4_2625	0.34	-0.6
2,964,644	-		Pf1N1B4_2625	0.34	-1.4
2,964,644	-		Pf1N1B4_2625	0.34	-0.9
2,964,665	+		Pf1N1B4_2625	0.42	-0.9
2,964,666	-		Pf1N1B4_2625	0.42	-1.4
2,964,666	-		Pf1N1B4_2625	0.42	-1.0
2,964,666	-		Pf1N1B4_2625	0.42	-0.9
2,964,690	-		Pf1N1B4_2625	0.50	-0.9
2,964,763	+		Pf1N1B4_2625	0.75	+0.4
2,964,763	+		Pf1N1B4_2625	0.75	-2.0
2,964,763	+		Pf1N1B4_2625	0.75	-0.6
2,964,763	+		Pf1N1B4_2625	0.75	-1.6
2,964,763	+		Pf1N1B4_2625	0.75	+0.4
2,964,764	-		Pf1N1B4_2625	0.76	+0.7
2,964,764	-		Pf1N1B4_2625	0.76	+0.4
2,964,764	-		Pf1N1B4_2625	0.76	+0.4
2,964,764	-		Pf1N1B4_2625	0.76	-0.6
2,964,764	-		Pf1N1B4_2625	0.76	-0.5
2,964,931	+		Pf1N1B4_2626	0.12	+1.4
2,964,931	+		Pf1N1B4_2626	0.12	+0.2
2,964,932	-		Pf1N1B4_2626	0.13	+1.7
2,964,932	-		Pf1N1B4_2626	0.13	-0.6
2,964,932	-		Pf1N1B4_2626	0.13	-1.2
2,964,932	-		Pf1N1B4_2626	0.13	-1.4
2,964,932	-		Pf1N1B4_2626	0.13	-0.9
2,964,964	+		Pf1N1B4_2626	0.15	+0.7
2,964,964	+		Pf1N1B4_2626	0.15	+2.1
2,964,964	+		Pf1N1B4_2626	0.15	+0.4
2,964,965	-		Pf1N1B4_2626	0.16	-1.2
2,964,965	-		Pf1N1B4_2626	0.16	+3.0
2,964,965	-		Pf1N1B4_2626	0.16	+0.7
2,964,965	-		Pf1N1B4_2626	0.16	-0.9
2,965,072	-		Pf1N1B4_2626	0.25	-0.3
2,965,225	+		Pf1N1B4_2626	0.40	+1.3
2,965,225	+		Pf1N1B4_2626	0.40	+0.4
2,965,225	+		Pf1N1B4_2626	0.40	-2.0
2,965,226	-		Pf1N1B4_2626	0.40	-0.8
2,965,226	-		Pf1N1B4_2626	0.40	+0.4
2,965,226	-		Pf1N1B4_2626	0.40	+0.9
2,965,447	+		Pf1N1B4_2626	0.60	+0.6
2,965,447	+		Pf1N1B4_2626	0.60	+1.5
2,965,447	+		Pf1N1B4_2626	0.60	-0.2
2,965,447	+		Pf1N1B4_2626	0.60	+0.1
2,965,447	+		Pf1N1B4_2626	0.60	-0.0
2,965,447	+		Pf1N1B4_2626	0.60	+1.0
2,965,447	+		Pf1N1B4_2626	0.60	-1.7
2,965,448	-		Pf1N1B4_2626	0.60	+1.4
2,965,448	-		Pf1N1B4_2626	0.60	-0.4
2,965,448	-				-0.2
2,965,448	-				+2.4
2,965,448	-		Pf1N1B4_2626	0.60	-2.5
2,965,448	-		Pf1N1B4_2626	0.60	+0.6
2,965,513	+		Pf1N1B4_2626	0.66	+1.1
2,965,514	-		Pf1N1B4_2626	0.66	+2.0
2,965,514	-		Pf1N1B4_2626	0.66	-2.2
2,965,516	+		Pf1N1B4_2626	0.66	+1.8
2,965,516	+		Pf1N1B4_2626	0.66	-0.9
2,965,516	+		Pf1N1B4_2626	0.66	-1.0
2,965,516	+		Pf1N1B4_2626	0.66	+0.2
2,965,517	-		Pf1N1B4_2626	0.66	-0.3
2,965,517	-		Pf1N1B4_2626	0.66	+1.0
2,965,517	-		Pf1N1B4_2626	0.66	+0.2
2,965,618	+		Pf1N1B4_2626	0.76	-0.6
2,965,618	+		Pf1N1B4_2626	0.76	-0.5
2,965,618	+				+0.4
2,965,636	+		Pf1N1B4_2626	0.77	-2.7
2,965,636	+		Pf1N1B4_2626	0.77	-1.9
2,965,636	+		Pf1N1B4_2626	0.77	+0.7
2,965,636	+		Pf1N1B4_2626	0.77	-0.3
2,965,636	+		Pf1N1B4_2626	0.77	-0.2
2,965,637	-		Pf1N1B4_2626	0.77	+0.6
2,965,637	-		Pf1N1B4_2626	0.77	-0.2
2,965,637	-		Pf1N1B4_2626	0.77	-1.4
2,965,637	-		Pf1N1B4_2626	0.77	+2.0
2,965,637	-		Pf1N1B4_2626	0.77	-1.4
2,965,798	+				+0.2
2,965,798	+				+0.2
2,965,799	-				+0.9
2,965,799	-				-2.2
2,965,799	-				-2.7
2,965,799	-				+1.0
2,965,854	+				+0.1
2,965,854	+				+1.2
2,965,854	+				+1.8
2,965,855	-				+1.3
2,965,855	-				+1.9
2,965,855	-				+0.6
2,965,875	+				+0.1
2,965,875	+				+1.4
2,965,875	+				+0.1
2,965,875	+				+1.3
2,965,875	+				+1.6
2,965,876	-				+1.2
2,965,876	-				+0.0
2,965,876	-				+0.3
2,965,876	-				-0.3
2,965,879	+				-0.3
2,965,880	-				+0.4
2,965,893	+				-2.0
2,965,995	-		Pf1N1B4_2627	0.13	-0.9
2,966,224	+		Pf1N1B4_2627	0.43	+1.4
2,966,225	-		Pf1N1B4_2627	0.44	-1.6
2,966,234	-		Pf1N1B4_2627	0.45	-0.9
2,966,299	+		Pf1N1B4_2627	0.53	-0.1
2,966,458	+		Pf1N1B4_2627	0.74	-2.4
2,966,458	+		Pf1N1B4_2627	0.74	+1.8
2,966,458	+		Pf1N1B4_2627	0.74	+0.7
2,966,458	+		Pf1N1B4_2627	0.74	-0.6
2,966,458	+		Pf1N1B4_2627	0.74	-0.9
2,966,458	+		Pf1N1B4_2627	0.74	+0.3
2,966,458	+		Pf1N1B4_2627	0.74	+0.4
2,966,459	-		Pf1N1B4_2627	0.74	+1.4
2,966,459	-		Pf1N1B4_2627	0.74	-1.2
2,966,459	-		Pf1N1B4_2627	0.74	-0.7
2,966,459	-		Pf1N1B4_2627	0.74	+0.4
2,966,459	-		Pf1N1B4_2627	0.74	-1.4
2,966,459	-		Pf1N1B4_2627	0.74	+1.2
2,966,459	-		Pf1N1B4_2627	0.74	+0.7
2,966,459	-		Pf1N1B4_2627	0.74	-3.4
2,966,459	-				+1.8
2,966,578	+				+0.9
2,966,578	+				-1.2
2,966,578	+				+1.0
2,966,578	+				+0.1
2,966,578	+				-0.9
2,966,578	+				-0.7
2,966,578	+				+2.9
2,966,578	+				-0.3
2,966,579	-				-1.2
2,966,579	-				+1.3
2,966,579	-				-0.4
2,966,579	-				+5.2
2,966,579	-				+0.4
2,966,637	+				+0.7
2,966,638	-				+0.1
2,966,837	+				-0.3
2,966,837	+				+0.7
2,966,837	+				+2.7
2,966,837	+				+0.4
2,966,837	+				+0.4
2,966,837	+				+1.0
2,966,837	+				+1.1
2,966,838	-				-1.9
2,966,838	-				-1.1
2,966,851	-				+0.1
2,966,873	+				-1.4
2,966,873	+				+2.4
2,966,874	-				-1.2
2,966,874	-				-1.4
2,966,874	-				+0.7
2,966,874	-				+1.1