Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2559

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,899,941	+		Pf1N1B4_2557	0.64	-0.2
2,899,941	+		Pf1N1B4_2557	0.64	+1.4
2,899,941	+		Pf1N1B4_2557	0.64	+1.3
2,900,000	+		Pf1N1B4_2557	0.70	-2.0
2,900,076	+		Pf1N1B4_2557	0.78	+0.3
2,900,076	+				+0.8
2,900,180	+		Pf1N1B4_2557	0.89	+0.5
2,900,224	+				+0.8
2,900,225	-				+1.4
2,900,243	+				-1.3
2,900,244	-				+1.9
2,900,244	-				-1.9
2,900,325	+				+0.2
2,900,325	+				+0.6
2,900,326	-				-0.2
2,900,760	-				-1.2
2,900,760	-				+1.4
2,900,760	-				-0.9
2,900,789	+				+0.8
2,900,789	+				-2.0
2,900,789	+				-0.2
2,900,789	+				-2.2
2,900,789	+				-0.6
2,900,789	+				+1.2
2,900,789	+				-2.3
2,900,789	+				+1.1
2,900,789	+				+1.4
2,900,789	+				-1.6
2,900,789	+				-0.8
2,900,789	+				+0.4
2,900,789	+				-1.7
2,900,789	+				-1.4
2,900,789	+				-2.0
2,900,789	+				-1.9
2,900,790	-				-0.9
2,900,790	-				+2.0
2,900,790	-				+0.1
2,900,790	-				+1.1
2,900,790	-				+1.4
2,900,792	+				-0.6
2,900,792	+				-0.6
2,900,849	+				+0.2
2,900,849	+				-0.3
2,900,890	+				+0.8
2,900,890	+				+0.8
2,902,001	+		Pf1N1B4_2560	0.53	-1.4
2,902,002	-				+1.4
2,902,002	-		Pf1N1B4_2560	0.54	+0.4
2,902,003	+		Pf1N1B4_2560	0.55	-2.2
2,902,003	+		Pf1N1B4_2560	0.55	-1.2
2,902,004	-		Pf1N1B4_2560	0.56	-2.0
2,902,004	-		Pf1N1B4_2560	0.56	+0.3
2,902,004	-		Pf1N1B4_2560	0.56	+0.4
2,902,004	-		Pf1N1B4_2560	0.56	+1.6
2,902,004	-		Pf1N1B4_2560	0.56	-0.3
2,902,004	-		Pf1N1B4_2560	0.56	-0.3
2,902,004	-		Pf1N1B4_2560	0.56	-0.3
2,902,004	-		Pf1N1B4_2560	0.56	+0.6
2,902,004	-		Pf1N1B4_2560	0.56	+0.6
2,902,004	-		Pf1N1B4_2560	0.56	+2.3
2,902,004	-		Pf1N1B4_2560	0.56	-2.7
2,902,004	-		Pf1N1B4_2560	0.56	-1.2
2,902,008	+		Pf1N1B4_2560	0.59	-1.9
2,902,009	-		Pf1N1B4_2560	0.60	+0.4
2,902,014	+		Pf1N1B4_2560	0.64	-1.7
2,902,063	+				-0.2
2,902,459	+				-0.3
2,902,459	+				+2.0
2,902,459	+				-1.5
2,902,459	+				-1.2
2,902,460	-				-0.9
2,902,460	-				+0.6
2,902,460	-				-0.7
2,902,460	-				+0.9
2,902,460	-				-1.6
2,902,460	-				-0.6
2,902,462	+				+0.3
2,902,463	-				+0.9
2,902,463	-				+1.6