Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2475

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,806,098	+				+0.7
2,806,098	+				+0.1
2,806,098	+				-0.4
2,806,099	-				-0.9
2,806,099	-				+0.1
2,806,099	-				+0.1
2,806,099	-				+1.7
2,806,099	-				-1.9
2,806,110	+				+1.0
2,806,110	+				+0.5
2,806,110	+				+0.5
2,806,110	+				-0.1
2,806,110	+				-1.7
2,806,110	+				-1.1
2,806,110	+				-3.2
2,806,111	-				+0.5
2,806,111	-				-0.1
2,806,111	-				+0.7
2,806,111	-				+0.0
2,806,111	-				+0.7
2,806,137	+		Pf1N1B4_2474	0.12	-0.9
2,806,138	-		Pf1N1B4_2474	0.12	-0.1
2,806,212	+		Pf1N1B4_2474	0.27	-2.2
2,806,212	+		Pf1N1B4_2474	0.27	+0.5
2,806,213	-		Pf1N1B4_2474	0.27	-1.4
2,806,213	-		Pf1N1B4_2474	0.27	+2.7
2,806,213	-		Pf1N1B4_2474	0.27	-1.2
2,806,213	-		Pf1N1B4_2474	0.27	+2.3
2,806,347	+		Pf1N1B4_2474	0.56	-0.9
2,806,347	+		Pf1N1B4_2474	0.56	-0.5
2,806,348	-		Pf1N1B4_2474	0.56	+1.6
2,806,348	-		Pf1N1B4_2474	0.56	+0.2
2,806,348	-		Pf1N1B4_2474	0.56	-0.9
2,806,348	-		Pf1N1B4_2474	0.56	-0.5
2,806,377	+		Pf1N1B4_2474	0.62	+0.2
2,806,378	-		Pf1N1B4_2474	0.62	-0.5
2,806,378	-		Pf1N1B4_2474	0.62	+1.0
2,806,532	+				+1.0
2,806,532	+				-2.1
2,806,533	-				-0.8
2,806,533	-				-0.3
2,806,554	+				-0.0
2,806,669	+				+0.3
2,806,669	+				-0.2
2,806,670	-				+0.2
2,806,851	+				+1.0
2,806,851	+				+0.7
2,806,851	+				-0.5
2,806,915	+				-0.5
2,806,916	-				-0.5
2,807,121	+		Pf1N1B4_2475	0.38	+0.7
2,807,122	-		Pf1N1B4_2475	0.38	-1.4
2,807,395	+		Pf1N1B4_2475	0.77	-1.4
2,807,429	+		Pf1N1B4_2475	0.82	+0.5
2,807,557	+				-1.9
2,807,557	+				+3.0
2,807,557	+				+2.2
2,807,558	-				+1.6
2,807,558	-				-1.5
2,807,558	-				+1.9
2,807,692	+				-0.5
2,807,693	-				-1.4
2,807,693	-				+0.6
2,807,732	+				-0.7
2,808,064	+		Pf1N1B4_2476	0.26	-2.9
2,808,080	+		Pf1N1B4_2476	0.27	-0.5
2,808,080	+		Pf1N1B4_2476	0.27	+0.5
2,808,080	+		Pf1N1B4_2476	0.27	-1.2
2,808,080	+		Pf1N1B4_2476	0.27	-0.1
2,808,081	-		Pf1N1B4_2476	0.27	+2.1
2,808,081	-		Pf1N1B4_2476	0.27	+0.1
2,808,081	-		Pf1N1B4_2476	0.27	+0.7
2,808,081	-				+3.0
2,808,081	-		Pf1N1B4_2476	0.27	-0.9
2,808,081	-		Pf1N1B4_2476	0.27	-1.5
2,808,081	-		Pf1N1B4_2476	0.27	-0.1