Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2412

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,731,980	-		Pf1N1B4_2411	0.81	-1.1
2,732,379	-				-1.9
2,732,434	+				-1.6
2,732,435	-				-0.9
2,732,435	-				+1.4
2,732,435	-				-1.1
2,732,527	-		Pf1N1B4_2412	0.13	-0.3
2,732,527	-		Pf1N1B4_2412	0.13	-0.6
2,732,527	-		Pf1N1B4_2412	0.13	-1.6
2,732,527	-		Pf1N1B4_2412	0.13	-1.4
2,732,792	+		Pf1N1B4_2412	0.33	+0.4
2,732,843	+				-0.6
2,732,844	-		Pf1N1B4_2412	0.36	-0.6
2,732,844	-		Pf1N1B4_2412	0.36	-2.5
2,732,869	-		Pf1N1B4_2412	0.38	-2.1
2,733,055	+		Pf1N1B4_2412	0.52	-1.4
2,733,055	+		Pf1N1B4_2412	0.52	-0.1
2,733,055	+		Pf1N1B4_2412	0.52	-1.1
2,733,056	-		Pf1N1B4_2412	0.52	-0.7
2,733,227	-		Pf1N1B4_2412	0.64	+0.4
2,733,698	+				-0.1
2,733,698	+				-0.0
2,733,701	+				+1.4
2,733,701	+				+1.0
2,733,702	-				-0.3
2,733,702	-				+0.2
2,733,702	-				+1.1
2,733,760	+				-2.1
2,733,760	+				+0.7
2,733,760	+				-0.8
2,733,761	-				-2.0
2,733,761	-				+1.0
2,733,790	-				-0.9
2,733,800	-				-0.2
2,733,807	-				+1.6