Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2299

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,616,255	+		Pf1N1B4_2298	0.39	-1.5
2,616,255	+		Pf1N1B4_2298	0.39	+0.5
2,616,255	+		Pf1N1B4_2298	0.39	+0.9
2,616,255	+		Pf1N1B4_2298	0.39	-1.3
2,616,255	+		Pf1N1B4_2298	0.39	-2.2
2,616,256	-		Pf1N1B4_2298	0.39	-1.3
2,616,386	+		Pf1N1B4_2298	0.49	+1.8
2,616,387	-		Pf1N1B4_2298	0.49	-1.1
2,616,387	-		Pf1N1B4_2298	0.49	+2.4
2,616,387	-		Pf1N1B4_2298	0.49	-0.9
2,616,504	+		Pf1N1B4_2298	0.57	-0.9
2,616,504	+		Pf1N1B4_2298	0.57	+1.1
2,616,504	+		Pf1N1B4_2298	0.57	+2.0
2,616,720	+		Pf1N1B4_2298	0.73	+1.5
2,616,720	+				+0.9
2,616,720	+		Pf1N1B4_2298	0.73	-0.4
2,616,721	-		Pf1N1B4_2298	0.73	-1.7
2,616,865	-		Pf1N1B4_2298	0.83	-2.0
2,616,865	-		Pf1N1B4_2298	0.83	-1.3
2,617,045	+				-1.5
2,617,153	-				+0.2
2,617,377	+		Pf1N1B4_2299	0.21	+0.3
2,617,378	-		Pf1N1B4_2299	0.21	-1.5
2,617,449	+		Pf1N1B4_2299	0.26	-2.4
2,617,450	-		Pf1N1B4_2299	0.26	-0.9
2,618,056	-		Pf1N1B4_2299	0.70	-0.5
2,618,056	-		Pf1N1B4_2299	0.70	-0.5
2,618,119	-		Pf1N1B4_2299	0.75	-1.3
2,618,119	-		Pf1N1B4_2299	0.75	-4.2
2,618,418	+				-0.5
2,618,418	+				+1.5
2,618,418	+				-0.3
2,618,418	+				-0.1
2,618,419	-				-1.9
2,618,419	-				-0.9
2,618,482	+				-1.2
2,618,483	-				-0.5
2,618,483	-				+1.5
2,618,483	-				-1.9
2,618,483	-				+0.1
2,618,500	-				-1.3
2,619,062	-				+0.9
2,619,062	-				-1.7
2,619,062	-				-0.5
2,619,062	-				+0.9
2,619,062	-				+0.1
2,619,062	-				+1.4