Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2036

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,323,358	+		Pf1N1B4_2035	0.57	-1.7
2,323,358	+		Pf1N1B4_2035	0.57	+0.6
2,323,448	+		Pf1N1B4_2035	0.61	-0.1
2,323,502	+		Pf1N1B4_2035	0.64	-1.0
2,323,503	-		Pf1N1B4_2035	0.64	-1.2
2,323,610	+		Pf1N1B4_2035	0.68	-1.2
2,323,787	+		Pf1N1B4_2035	0.76	-0.1
2,323,787	+		Pf1N1B4_2035	0.76	-1.7
2,323,799	+		Pf1N1B4_2035	0.77	-1.6
2,323,865	+		Pf1N1B4_2035	0.80	+0.0
2,323,865	+		Pf1N1B4_2035	0.80	-0.6
2,323,865	+		Pf1N1B4_2035	0.80	+0.3
2,323,865	+		Pf1N1B4_2035	0.80	+1.3
2,323,866	-		Pf1N1B4_2035	0.80	-0.7
2,323,928	+		Pf1N1B4_2035	0.82	+0.2
2,323,929	-		Pf1N1B4_2035	0.82	-3.3
2,323,929	-		Pf1N1B4_2035	0.82	+0.6
2,324,318	+				+0.8
2,324,330	+				+0.7
2,324,339	+				+0.1
2,324,339	+				-0.4
2,324,339	+				+0.4
2,324,339	+				+1.6
2,324,339	+				-0.6
2,324,339	+				-3.3
2,325,194	+		Pf1N1B4_2036	0.51	+0.4
2,325,195	-				-0.7
2,325,341	+		Pf1N1B4_2036	0.59	+2.2
2,325,341	+		Pf1N1B4_2036	0.59	+0.1
2,325,341	+		Pf1N1B4_2036	0.59	-0.1
2,325,342	-		Pf1N1B4_2036	0.59	+0.0
2,325,342	-		Pf1N1B4_2036	0.59	-3.0
2,325,353	+		Pf1N1B4_2036	0.60	+0.0
2,325,353	+		Pf1N1B4_2036	0.60	+0.6
2,325,353	+		Pf1N1B4_2036	0.60	+1.4
2,325,428	+		Pf1N1B4_2036	0.65	-1.7
2,325,458	+				+0.0
2,325,818	+		Pf1N1B4_2036	0.88	-0.3
2,325,818	+		Pf1N1B4_2036	0.88	+0.1
2,325,863	+				+1.2
2,325,863	+				+1.9
2,325,863	+				-0.1
2,325,914	+				-0.6
2,325,971	+				+0.9
2,325,998	+				-1.7
2,325,998	+				+0.6
2,326,012	+				+1.0
2,326,139	+				-0.2
2,326,139	+				+0.2
2,326,139	+				+0.6
2,326,494	+		Pf1N1B4_2037	0.36	-2.9
2,326,495	-		Pf1N1B4_2037	0.36	-2.1
2,326,593	+		Pf1N1B4_2037	0.47	+3.0
2,326,594	-		Pf1N1B4_2037	0.48	-0.4
2,326,777	+		Pf1N1B4_2037	0.70	-2.7
2,326,778	-		Pf1N1B4_2037	0.70	-1.4
2,326,932	+		Pf1N1B4_2037	0.88	-0.7
2,326,932	+		Pf1N1B4_2037	0.88	+0.3
2,326,932	+		Pf1N1B4_2037	0.88	-0.4
2,326,932	+		Pf1N1B4_2037	0.88	-1.2
2,326,933	-		Pf1N1B4_2037	0.88	+1.3