Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2025

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,310,891	+		Pf1N1B4_2024	0.73	-1.0
2,310,892	-		Pf1N1B4_2024	0.73	-0.7
2,311,206	+				-1.0
2,311,206	+				-0.6
2,311,206	+				-0.4
2,311,207	-				-0.7
2,311,239	-				-0.5
2,311,281	+				-1.9
2,311,335	-				+1.8
2,311,402	+				-1.6
2,311,402	+				+0.3
2,311,402	+				+1.6
2,311,403	-				+0.1
2,311,403	-				+1.7
2,311,403	-				+2.1
2,311,403	-				+1.2
2,311,406	-				+1.4
2,311,406	-				+3.6
2,311,406	-				+1.5
2,311,406	-				+0.8
2,311,406	-				+1.5
2,311,406	-				+2.1
2,311,406	-				+1.5
2,311,406	-				+1.1
2,311,406	-				+1.5
2,311,406	-				+1.2
2,311,471	-				+0.5
2,311,471	-				+1.8
2,311,471	-				+1.6
2,311,472	+				-0.4
2,311,472	+				+0.6
2,311,472	+				+0.3
2,311,472	+				-1.0
2,311,472	+				-0.2
2,311,472	+				+0.6
2,311,472	+				-2.6
2,311,472	+				-0.6
2,311,472	+				+0.9
2,311,472	+				+1.0
2,311,472	+				+1.6
2,311,472	+				+0.8
2,311,472	+				+0.0
2,311,472	+				+1.2
2,311,472	+				-1.0
2,311,472	+				+1.2
2,311,472	+				-1.7
2,311,472	+				+0.8
2,311,472	+				-0.9
2,311,473	-				+0.4
2,311,473	-				+1.1
2,311,473	-				+3.1
2,311,473	-				+0.6
2,311,473	-				+1.6
2,311,473	-				+1.6
2,311,473	-				+1.1
2,311,473	-				+1.1
2,311,473	-				+1.1
2,311,473	-				-1.5
2,311,473	-				+0.6
2,311,473	-				+1.0
2,311,473	-				+3.2
2,311,473	-				+1.3
2,311,473	-				+0.9
2,311,473	-				+0.8
2,311,473	-				+1.4
2,311,473	-				+1.5
2,311,473	-				-0.4
2,311,473	-				+0.7
2,311,473	-				+1.3
2,311,473	-				+0.8
2,311,473	-				+0.9
2,311,473	-				+1.1
2,311,473	-				+2.6
2,311,473	-				+2.1
2,311,473	-				+2.2
2,311,473	-				+1.0
2,311,473	-				+1.7
2,311,473	-				+1.8
2,311,473	-				+0.2
2,311,473	-				-0.7
2,311,473	-				-2.1
2,311,473	-				+1.5
2,311,473	-				+1.5
2,311,473	-				+1.5
2,311,473	-				+2.0
2,311,473	-				+2.1
2,311,473	-				+0.5
2,311,473	-				+2.5
2,311,473	-				+1.9
2,311,473	-				+2.3
2,311,473	-				+1.9
2,311,476	+				-1.7
2,311,476	+				-0.4
2,311,476	+				+0.6
2,311,476	+				-1.4
2,311,476	+				-0.7
2,311,476	+				+0.6
2,311,476	+				-0.7
2,311,476	+				-0.9
2,311,476	+				-0.7
2,311,476	+				-0.2
2,311,477	-				-0.2
2,311,477	-				+0.5
2,311,477	-				+0.6
2,311,477	-				+1.7
2,311,477	-				+2.0
2,311,477	-				+1.6
2,311,477	-				+1.2
2,311,477	-				+1.3
2,311,477	-				-0.1
2,311,477	-				+0.9
2,311,477	-				+0.5
2,311,477	-				+1.2
2,311,477	-				+1.5
2,311,477	-				+0.7
2,311,477	-				+1.3
2,311,477	-				+2.3
2,311,477	-				+1.1
2,311,477	-				+0.5
2,311,477	-				+0.5
2,311,477	-				+1.3
2,311,477	-				+1.7
2,311,477	-				+1.9
2,311,477	-				+1.4
2,311,477	-				+0.7
2,311,560	+				+1.2
2,311,561	-				-0.2
2,311,561	-				-0.5
2,311,561	-				+0.0
2,311,561	-				+2.0
2,311,561	-				+1.6
2,311,561	-				+0.6
2,311,561	-				+0.4
2,311,561	-				+1.2
2,311,561	-				-2.0
2,311,561	-				+1.1
2,311,561	-				+1.7
2,311,561	-				+1.2
2,311,564	+				-1.2
2,311,564	+				+0.6
2,311,564	+				-0.6
2,311,564	+				+0.0
2,311,565	-				+0.4
2,311,565	-				+0.9
2,311,565	-				-1.2
2,311,565	-				+1.9
2,311,565	-				+0.1
2,311,565	-				-0.1
2,311,565	-				+0.1
2,311,565	-				-1.0
2,311,565	-				+1.2
2,311,734	-				+1.3
2,311,734	-				+0.1
2,311,734	-				+2.3
2,311,734	-				-0.4
2,311,767	+				-0.6
2,311,767	+				+0.4
2,311,768	-				+0.0
2,311,768	-				+1.3
2,311,982	-		Pf1N1B4_2025	0.12	-0.4
2,312,846	-		Pf1N1B4_2025	0.72	-0.3
2,313,166	+				+0.0
2,313,167	-				-1.2
2,313,170	-				+1.1
2,313,183	+				+0.0
2,313,292	+				+2.1
2,313,331	+				+2.1
2,313,331	+				+1.1
2,313,352	-				+0.5
2,313,393	-				-1.2
2,313,453	-				+1.0
2,313,867	+		Pf1N1B4_2026	0.49	-1.6
2,313,867	+				+0.0
2,313,867	+		Pf1N1B4_2026	0.49	-1.9
2,314,018	-		Pf1N1B4_2026	0.65	+0.0
2,314,082	+		Pf1N1B4_2026	0.72	+0.4
2,314,083	-		Pf1N1B4_2026	0.72	-1.9
2,314,088	+		Pf1N1B4_2026	0.73	-0.4
2,314,088	+		Pf1N1B4_2026	0.73	-1.7
2,314,088	+		Pf1N1B4_2026	0.73	+0.0
2,314,088	+		Pf1N1B4_2026	0.73	-1.4
2,314,089	-		Pf1N1B4_2026	0.73	-0.5
2,314,089	-		Pf1N1B4_2026	0.73	-0.4
2,314,089	-				+0.6
2,314,092	+		Pf1N1B4_2026	0.73	+0.0
2,314,092	+		Pf1N1B4_2026	0.73	-1.0