Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1928

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,204,733	-		Pf1N1B4_1927	0.12	-0.7
2,204,733	-		Pf1N1B4_1927	0.12	-0.4
2,204,733	-		Pf1N1B4_1927	0.12	-1.1
2,204,806	-		Pf1N1B4_1927	0.18	-2.8
2,204,806	-		Pf1N1B4_1927	0.18	-1.1
2,204,806	-		Pf1N1B4_1927	0.18	-1.7
2,204,806	-		Pf1N1B4_1927	0.18	+0.0
2,204,810	-		Pf1N1B4_1927	0.19	+0.0
2,204,810	-		Pf1N1B4_1927	0.19	-1.2
2,204,810	-		Pf1N1B4_1927	0.19	-0.6
2,204,810	-		Pf1N1B4_1927	0.19	+0.0
2,204,810	-		Pf1N1B4_1927	0.19	-0.1
2,204,810	-		Pf1N1B4_1927	0.19	-1.8
2,204,810	-		Pf1N1B4_1927	0.19	-0.8
2,204,810	-		Pf1N1B4_1927	0.19	+1.4
2,204,912	-		Pf1N1B4_1927	0.28	+1.1
2,204,912	-		Pf1N1B4_1927	0.28	+0.8
2,204,912	-		Pf1N1B4_1927	0.28	-2.0
2,204,927	-		Pf1N1B4_1927	0.29	-1.9
2,205,043	-		Pf1N1B4_1927	0.40	-1.9
2,205,043	-		Pf1N1B4_1927	0.40	+1.6
2,205,043	-		Pf1N1B4_1927	0.40	+0.6
2,205,043	-		Pf1N1B4_1927	0.40	+0.6
2,205,118	-		Pf1N1B4_1927	0.47	-1.4
2,205,118	-		Pf1N1B4_1927	0.47	-2.7
2,205,118	-		Pf1N1B4_1927	0.47	+1.3
2,205,118	-		Pf1N1B4_1927	0.47	+1.6
2,205,118	-		Pf1N1B4_1927	0.47	+0.0
2,205,138	-		Pf1N1B4_1927	0.48	-0.4
2,205,138	-		Pf1N1B4_1927	0.48	-1.0
2,205,200	-		Pf1N1B4_1927	0.54	-0.7
2,205,449	+		Pf1N1B4_1927	0.77	+0.8
2,205,449	+		Pf1N1B4_1927	0.77	-1.2
2,205,449	+		Pf1N1B4_1927	0.77	-1.0
2,205,502	+		Pf1N1B4_1927	0.81	-1.4
2,205,502	+		Pf1N1B4_1927	0.81	-0.4
2,205,503	-		Pf1N1B4_1927	0.82	+0.6
2,205,503	-		Pf1N1B4_1927	0.82	-0.4
2,205,503	-		Pf1N1B4_1927	0.82	-1.0
2,205,503	-		Pf1N1B4_1927	0.82	-1.4
2,205,503	-		Pf1N1B4_1927	0.82	+0.8
2,205,503	-		Pf1N1B4_1927	0.82	+1.9
2,205,534	-		Pf1N1B4_1927	0.84	+0.0
2,205,536	+		Pf1N1B4_1927	0.85	+0.6
2,205,536	+		Pf1N1B4_1927	0.85	-1.4
2,205,536	+		Pf1N1B4_1927	0.85	-0.1
2,205,537	-		Pf1N1B4_1927	0.85	-1.0
2,205,547	+		Pf1N1B4_1927	0.86	-0.4
2,205,698	+				-1.0
2,205,698	+				+0.8
2,205,698	+				-2.2
2,205,698	+				+0.0
2,205,698	+				-0.4
2,205,698	+				-0.7
2,205,698	+				+0.8
2,205,699	-				-0.4
2,205,699	-				-2.1
2,205,699	-				-1.9
2,205,699	-				-0.7
2,205,699	-				-1.0
2,205,699	-				+1.3
2,205,708	+				-1.0
2,205,708	+				-1.2
2,205,708	+				+0.0
2,205,708	+				-1.6
2,205,708	+				-0.7
2,205,708	+				-0.2
2,205,708	+				-0.1
2,205,708	+				+0.0
2,205,708	+				-1.9
2,205,708	+				+1.0
2,205,708	+				-1.7
2,205,708	+				-0.2
2,205,708	+				-2.2
2,205,708	+				-0.7
2,205,709	-				-0.5
2,205,709	-				-1.9
2,205,709	-				+1.3
2,205,709	-				-2.5
2,205,709	-				-3.1
2,205,709	-				+0.5
2,205,709	-				+0.6
2,205,709	-				+0.3
2,205,709	-				+0.1
2,205,709	-				-1.0
2,205,709	-				-1.6
2,205,709	-				+0.8
2,205,709	-				+0.6
2,205,709	-				-0.8
2,205,709	-				-1.6
2,205,709	-				-1.1
2,205,709	-				+0.6
2,205,709	-				-1.2
2,205,709	-				+2.0
2,205,709	-				+1.7
2,205,709	-				-2.2
2,205,709	-				-0.7
2,205,724	+				-0.3
2,205,724	+				-0.7
2,205,724	+				-1.4
2,205,724	+				-2.4
2,205,724	+				+2.1
2,205,724	+				-1.0
2,205,724	+				+0.9
2,205,724	+				-1.0
2,205,725	-				-1.0
2,205,725	-				-1.0
2,205,725	-				-2.1
2,205,725	-				-0.4
2,205,725	-				-2.1
2,205,725	-				+1.8
2,205,725	-				+1.6
2,205,725	-				-0.4
2,205,725	-				+1.8
2,205,725	-				+0.0
2,205,725	-				-0.4
2,205,725	-				-1.3
2,205,725	-				+1.9
2,205,725	-				+2.8
2,205,725	-				-0.2
2,205,725	-				+0.1
2,205,725	-				-1.0
2,205,725	-				-0.7
2,205,728	+				-2.1
2,205,728	+				-1.2
2,205,728	+				+0.6
2,205,728	+				-0.7
2,205,728	+				-1.4
2,205,728	+				-1.4
2,205,728	+				+0.2
2,205,729	-				+1.9
2,205,729	-				+0.5
2,205,729	-				-0.7
2,205,729	-				-1.4
2,205,729	-				-0.4
2,205,729	-				-1.7
2,205,729	-				-0.4
2,205,729	-				+1.6
2,205,729	-				+0.1
2,205,729	-				+1.4
2,206,849	-				-0.3
2,206,852	-				-3.2
2,206,852	-				-1.0