Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1923

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,197,563	+				+0.8
2,197,582	+				-0.3
2,197,603	+				+1.6
2,197,603	+				-1.2
2,197,603	+				-1.6
2,197,604	-				-1.6
2,197,635	+				-1.7
2,197,638	-				-0.3
2,197,674	+				+1.7
2,197,685	+				-2.7
2,197,692	-				+0.6
2,197,692	-				-1.8
2,197,819	+				-1.6
2,197,898	+				+1.6
2,197,899	-				+1.0
2,197,914	+		Pf1N1B4_1923	0.10	+0.6
2,197,914	+		Pf1N1B4_1923	0.10	-0.1
2,197,914	+		Pf1N1B4_1923	0.10	-0.5
2,197,914	+		Pf1N1B4_1923	0.10	+0.5
2,197,914	+		Pf1N1B4_1923	0.10	-0.2
2,197,914	+		Pf1N1B4_1923	0.10	+0.7
2,197,915	-		Pf1N1B4_1923	0.10	-0.6
2,197,915	-		Pf1N1B4_1923	0.10	+3.6
2,197,915	-		Pf1N1B4_1923	0.10	-2.4
2,197,915	-		Pf1N1B4_1923	0.10	+0.2
2,197,915	-		Pf1N1B4_1923	0.10	-0.6
2,197,915	-		Pf1N1B4_1923	0.10	+0.8
2,197,915	-		Pf1N1B4_1923	0.10	+1.1
2,197,953	+		Pf1N1B4_1923	0.12	-0.8
2,197,953	+		Pf1N1B4_1923	0.12	+0.6
2,197,953	+		Pf1N1B4_1923	0.12	+1.4
2,197,953	+		Pf1N1B4_1923	0.12	-0.2
2,197,953	+		Pf1N1B4_1923	0.12	-0.0
2,197,953	+		Pf1N1B4_1923	0.12	-1.4
2,197,954	-		Pf1N1B4_1923	0.12	-0.7
2,197,954	-		Pf1N1B4_1923	0.12	+1.0
2,197,954	-		Pf1N1B4_1923	0.12	-0.2
2,197,954	-		Pf1N1B4_1923	0.12	-0.7
2,197,954	-		Pf1N1B4_1923	0.12	+0.6
2,197,954	-		Pf1N1B4_1923	0.12	-1.5
2,197,954	-		Pf1N1B4_1923	0.12	-0.0
2,198,099	-		Pf1N1B4_1923	0.18	-2.4
2,198,140	-		Pf1N1B4_1923	0.20	-1.0
2,198,140	-		Pf1N1B4_1923	0.20	-1.2
2,198,140	-		Pf1N1B4_1923	0.20	-2.0
2,198,201	+		Pf1N1B4_1923	0.23	-0.4
2,198,201	+		Pf1N1B4_1923	0.23	-0.2
2,198,201	+		Pf1N1B4_1923	0.23	+1.2
2,198,201	+		Pf1N1B4_1923	0.23	-0.4
2,198,201	+		Pf1N1B4_1923	0.23	-1.7
2,198,202	-		Pf1N1B4_1923	0.23	+0.5
2,198,202	-		Pf1N1B4_1923	0.23	+1.8
2,198,202	-		Pf1N1B4_1923	0.23	-1.7
2,198,202	-		Pf1N1B4_1923	0.23	-0.0
2,198,202	-		Pf1N1B4_1923	0.23	-2.7
2,198,202	-		Pf1N1B4_1923	0.23	-2.0
2,198,202	-		Pf1N1B4_1923	0.23	-1.4
2,198,202	-		Pf1N1B4_1923	0.23	+1.6
2,198,202	-		Pf1N1B4_1923	0.23	+0.7
2,198,207	+		Pf1N1B4_1923	0.23	-0.4
2,198,207	+		Pf1N1B4_1923	0.23	-2.0
2,198,207	+		Pf1N1B4_1923	0.23	+2.3
2,198,207	+		Pf1N1B4_1923	0.23	+1.4
2,198,207	+		Pf1N1B4_1923	0.23	-0.2
2,198,207	+		Pf1N1B4_1923	0.23	+1.3
2,198,208	-		Pf1N1B4_1923	0.23	+0.5
2,198,208	-		Pf1N1B4_1923	0.23	-0.3
2,198,208	-		Pf1N1B4_1923	0.23	+0.8
2,198,208	-		Pf1N1B4_1923	0.23	+0.8
2,198,208	-		Pf1N1B4_1923	0.23	-0.6
2,198,208	-		Pf1N1B4_1923	0.23	+1.0
2,198,375	+		Pf1N1B4_1923	0.30	+3.2
2,198,375	+		Pf1N1B4_1923	0.30	-2.7
2,198,375	+		Pf1N1B4_1923	0.30	+0.6
2,198,375	+		Pf1N1B4_1923	0.30	-0.7
2,198,375	+		Pf1N1B4_1923	0.30	-0.4
2,198,375	+		Pf1N1B4_1923	0.30	-1.2
2,198,375	+		Pf1N1B4_1923	0.30	-2.3
2,198,376	-		Pf1N1B4_1923	0.30	+0.7
2,198,376	-		Pf1N1B4_1923	0.30	+1.9
2,198,376	-		Pf1N1B4_1923	0.30	-0.6
2,198,376	-		Pf1N1B4_1923	0.30	+2.2
2,198,376	-		Pf1N1B4_1923	0.30	-0.9
2,198,376	-		Pf1N1B4_1923	0.30	-0.5
2,198,376	-		Pf1N1B4_1923	0.30	-0.9
2,198,378	+		Pf1N1B4_1923	0.30	-0.4
2,198,379	-				-0.7
2,198,504	-				+1.0
2,198,518	-		Pf1N1B4_1923	0.37	-1.3
2,198,646	+		Pf1N1B4_1923	0.42	-0.4
2,198,646	+		Pf1N1B4_1923	0.42	-0.0
2,198,646	+		Pf1N1B4_1923	0.42	+1.6
2,198,646	+		Pf1N1B4_1923	0.42	+1.8
2,198,647	-		Pf1N1B4_1923	0.42	-1.2
2,198,647	-		Pf1N1B4_1923	0.42	-1.0
2,198,814	+		Pf1N1B4_1923	0.49	+0.6
2,198,814	+		Pf1N1B4_1923	0.49	+1.3
2,198,814	+		Pf1N1B4_1923	0.49	-0.7
2,198,814	+		Pf1N1B4_1923	0.49	-0.2
2,198,815	-		Pf1N1B4_1923	0.49	-0.6
2,198,856	+				+3.9
2,198,857	-		Pf1N1B4_1923	0.51	+2.4
2,198,857	-		Pf1N1B4_1923	0.51	+1.0
2,198,874	-		Pf1N1B4_1923	0.52	-1.0
2,198,918	+		Pf1N1B4_1923	0.54	-0.7
2,198,919	-		Pf1N1B4_1923	0.54	-2.1
2,198,919	-		Pf1N1B4_1923	0.54	+0.6
2,198,919	-		Pf1N1B4_1923	0.54	+0.3
2,199,233	+		Pf1N1B4_1923	0.67	-0.1
2,199,233	+		Pf1N1B4_1923	0.67	-1.2
2,199,233	+		Pf1N1B4_1923	0.67	-0.1
2,199,234	-				+1.6
2,199,234	-		Pf1N1B4_1923	0.67	+1.7
2,199,234	-		Pf1N1B4_1923	0.67	+0.6
2,199,234	-		Pf1N1B4_1923	0.67	+0.3
2,199,234	-		Pf1N1B4_1923	0.67	+0.1
2,199,244	-		Pf1N1B4_1923	0.68	-1.2
2,199,244	-		Pf1N1B4_1923	0.68	-0.3
2,199,291	-		Pf1N1B4_1923	0.70	-0.0
2,199,291	-		Pf1N1B4_1923	0.70	-0.0
2,199,291	-		Pf1N1B4_1923	0.70	+2.9
2,199,350	+		Pf1N1B4_1923	0.73	-0.7
2,199,351	-		Pf1N1B4_1923	0.73	-0.2
2,199,381	+		Pf1N1B4_1923	0.74	-0.0
2,199,382	-		Pf1N1B4_1923	0.74	-1.2
2,199,382	-		Pf1N1B4_1923	0.74	-0.0
2,199,382	-		Pf1N1B4_1923	0.74	+1.1
2,199,382	-		Pf1N1B4_1923	0.74	+1.8
2,199,382	-		Pf1N1B4_1923	0.74	-2.7
2,199,382	-		Pf1N1B4_1923	0.74	-2.3
2,199,431	+		Pf1N1B4_1923	0.76	-0.0
2,199,431	+		Pf1N1B4_1923	0.76	+1.6
2,199,431	+		Pf1N1B4_1923	0.76	-1.4
2,199,432	-		Pf1N1B4_1923	0.76	+0.5
2,199,432	-		Pf1N1B4_1923	0.76	-0.0
2,199,436	-		Pf1N1B4_1923	0.76	+0.6
2,199,436	-		Pf1N1B4_1923	0.76	-2.3
2,199,436	-		Pf1N1B4_1923	0.76	-0.4
2,199,547	-		Pf1N1B4_1923	0.81	+1.2
2,199,655	+		Pf1N1B4_1923	0.86	+0.4
2,199,655	+		Pf1N1B4_1923	0.86	+0.5
2,199,757	+				-0.7
2,199,757	+				+1.6
2,199,757	+				-1.4
2,199,757	+				-2.5
2,199,757	+				-0.8
2,199,757	+				-1.9
2,199,757	+				-1.0
2,199,757	+				-0.6
2,199,757	+				+0.4
2,199,757	+				-1.7
2,199,758	-				+1.9
2,199,758	-				+1.6
2,199,758	-				-0.2
2,199,758	-				-1.0
2,199,758	-				-1.4
2,199,758	-				+2.1
2,199,758	-				-1.7
2,199,758	-				-0.4
2,199,758	-				-1.0
2,199,758	-				+1.4
2,199,758	-				-0.9
2,199,758	-				-0.4
2,199,758	-				-1.2
2,199,758	-				+1.2
2,199,758	-				+1.9
2,199,758	-				-2.0
2,199,758	-				-0.1
2,199,758	-				+4.0
2,199,758	-				+1.2
2,199,758	-				+1.6
2,199,758	-				+1.0
2,199,759	+				-0.0
2,199,759	+				-0.7
2,199,759	+				-0.0
2,199,759	+				-0.7
2,199,760	-				+0.1
2,199,760	-				-2.2
2,199,782	+				-0.9
2,199,783	-				-1.0
2,199,783	-				+0.2
2,199,828	+				-0.2
2,199,828	+				-0.9
2,199,829	-				-0.5
2,199,829	-				-1.6
2,199,829	-				-0.3
2,199,829	-				-0.0
2,200,030	-				-0.3
2,200,032	+				+1.6
2,200,044	+				+0.3
2,200,044	+				-0.4
2,200,044	+				+0.6
2,200,045	-				+0.5
2,200,045	-				+0.4
2,200,045	-				-1.0
2,200,080	+				-0.3
2,200,102	-		Pf1N1B4_1924	0.10	+0.6
2,200,102	-		Pf1N1B4_1924	0.10	-0.6
2,200,296	-		Pf1N1B4_1924	0.31	-0.7
2,200,296	-		Pf1N1B4_1924	0.31	-1.6
2,200,526	+		Pf1N1B4_1924	0.56	-1.1
2,200,526	+		Pf1N1B4_1924	0.56	+0.7
2,200,584	+		Pf1N1B4_1924	0.62	-0.4
2,200,584	+		Pf1N1B4_1924	0.62	+0.6
2,200,584	+		Pf1N1B4_1924	0.62	+1.4
2,200,585	-		Pf1N1B4_1924	0.62	+0.1
2,200,585	-		Pf1N1B4_1924	0.62	-1.6
2,200,585	-		Pf1N1B4_1924	0.62	+2.3
2,200,585	-		Pf1N1B4_1924	0.62	-0.5
2,200,585	-		Pf1N1B4_1924	0.62	+1.6
2,200,585	-		Pf1N1B4_1924	0.62	-0.2
2,200,585	-		Pf1N1B4_1924	0.62	-0.7
2,200,585	-		Pf1N1B4_1924	0.62	+0.8
2,200,585	-		Pf1N1B4_1924	0.62	+0.8
2,200,585	-		Pf1N1B4_1924	0.62	+1.6
2,200,585	-		Pf1N1B4_1924	0.62	-0.7
2,200,756	+				-0.0
2,200,756	+		Pf1N1B4_1924	0.80	-0.7
2,200,756	+		Pf1N1B4_1924	0.80	-0.7
2,200,756	+		Pf1N1B4_1924	0.80	+1.8
2,200,757	-		Pf1N1B4_1924	0.80	+1.1
2,200,757	-		Pf1N1B4_1924	0.80	+0.2
2,200,757	-		Pf1N1B4_1924	0.80	-0.7
2,200,757	-		Pf1N1B4_1924	0.80	-1.0
2,200,872	+				-0.7
2,200,872	+				-0.3
2,200,872	+				+0.7
2,200,872	+				-0.7
2,200,872	+				-1.4
2,200,872	+				-1.7
2,200,872	+				-0.7
2,200,872	+				-1.6
2,200,872	+				-2.6
2,200,872	+				-2.5
2,200,872	+				+1.6
2,200,872	+				+0.7
2,200,872	+				-0.3
2,200,872	+				-0.0
2,200,872	+				-1.2
2,200,872	+				+0.5
2,200,873	-				-0.1
2,200,873	-				+1.0
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				+1.6
2,200,873	-				-1.4
2,200,873	-				+0.6
2,200,873	-				+0.2
2,200,873	-				-1.9
2,200,873	-				+0.4
2,200,873	-				+0.2
2,200,946	+				-0.4
2,200,946	+				+0.3
2,200,946	+				+0.2
2,200,946	+				-1.6
2,200,979	+				-0.7
2,200,979	+				+1.2
2,200,979	+				+0.4