Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1507

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,738,771	-		Pf1N1B4_1506	0.40	+0.6
1,738,783	+		Pf1N1B4_1506	0.41	+2.0
1,738,783	+		Pf1N1B4_1506	0.41	-0.1
1,738,784	-		Pf1N1B4_1506	0.41	-2.2
1,738,897	-		Pf1N1B4_1506	0.50	-0.9
1,738,897	-		Pf1N1B4_1506	0.50	-2.1
1,738,988	+		Pf1N1B4_1506	0.57	+1.2
1,739,004	-		Pf1N1B4_1506	0.58	-2.2
1,739,056	-		Pf1N1B4_1506	0.62	-0.2
1,739,136	-		Pf1N1B4_1506	0.68	-1.3
1,739,282	-		Pf1N1B4_1506	0.79	-4.5
1,739,282	-		Pf1N1B4_1506	0.79	-2.4
1,739,479	+				+1.9
1,739,480	-				-1.1
1,739,480	-				+0.9
1,739,480	-				-2.1
1,739,529	-				-1.8
1,739,566	-				-1.3
1,739,624	-				-1.5
1,739,651	-				+1.1
1,739,651	-				-0.7
1,739,651	-				-2.9
1,739,721	-				-0.9
1,739,745	+				+0.1
1,739,745	+				+2.5
1,739,745	+				+1.8
1,739,745	+				-1.0
1,739,746	-				+0.3
1,739,746	-				-0.1
1,739,880	+		Pf1N1B4_1507	0.22	-1.5
1,739,880	+		Pf1N1B4_1507	0.22	-1.8
1,740,012	-		Pf1N1B4_1507	0.40	-1.8
1,740,073	-		Pf1N1B4_1507	0.49	-0.3
1,740,101	-		Pf1N1B4_1507	0.53	-2.9
1,740,101	-		Pf1N1B4_1507	0.53	-0.5
1,740,102	+				+0.5
1,740,103	-		Pf1N1B4_1507	0.53	-1.0
1,740,103	-		Pf1N1B4_1507	0.53	-0.5
1,740,103	-		Pf1N1B4_1507	0.53	-0.8
1,740,187	-		Pf1N1B4_1507	0.64	-2.6
1,740,240	-		Pf1N1B4_1507	0.71	-1.7
1,740,240	-		Pf1N1B4_1507	0.71	-1.3
1,740,364	+		Pf1N1B4_1507	0.88	+1.7
1,740,364	+		Pf1N1B4_1507	0.88	+0.5
1,740,365	-		Pf1N1B4_1507	0.88	-0.8
1,740,365	-		Pf1N1B4_1507	0.88	-1.8
1,740,365	-		Pf1N1B4_1507	0.88	-3.7
1,740,365	-				+3.1
1,740,569	+		Pf1N1B4_1508	0.13	-1.1
1,740,585	-		Pf1N1B4_1508	0.15	-1.1
1,740,585	-		Pf1N1B4_1508	0.15	-0.3
1,740,802	+		Pf1N1B4_1508	0.38	+0.9
1,740,802	+		Pf1N1B4_1508	0.38	-1.8
1,740,803	-		Pf1N1B4_1508	0.38	-2.5
1,740,803	-		Pf1N1B4_1508	0.38	-2.5
1,740,834	+				-0.1
1,741,320	-				+0.3
1,741,356	-				+0.2