Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1310

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,493,651	-				-0.4
1,493,689	+				+0.7
1,493,689	+				-0.3
1,493,689	+				-2.1
1,493,689	+				-0.9
1,493,690	-				+0.1
1,493,691	+				-2.6
1,493,763	+				-2.2
1,493,763	+				+1.8
1,493,763	+				-1.1
1,493,764	-				-1.5
1,494,088	+		Pf1N1B4_1310	0.43	-1.1
1,494,089	-		Pf1N1B4_1310	0.43	-1.4
1,494,323	+		Pf1N1B4_1310	0.70	+0.7
1,494,323	+		Pf1N1B4_1310	0.70	-0.7
1,494,323	+		Pf1N1B4_1310	0.70	+1.5
1,494,323	+		Pf1N1B4_1310	0.70	-1.7
1,494,324	-		Pf1N1B4_1310	0.70	+0.0
1,494,324	-		Pf1N1B4_1310	0.70	-2.3
1,494,324	-		Pf1N1B4_1310	0.70	-1.2
1,494,324	-		Pf1N1B4_1310	0.70	-0.9
1,494,348	+		Pf1N1B4_1310	0.72	+0.5
1,494,349	-		Pf1N1B4_1310	0.72	-1.0
1,494,385	+		Pf1N1B4_1310	0.77	-1.0
1,494,386	-		Pf1N1B4_1310	0.77	-0.9
1,494,386	-		Pf1N1B4_1310	0.77	-1.9
1,494,386	-		Pf1N1B4_1310	0.77	-1.3
1,494,516	+				+0.0
1,494,573	-				+2.5
1,494,606	-				-1.5
1,494,681	-				-1.9
1,494,734	-				+1.2
1,494,754	+		Pf1N1B4_1311	0.11	+0.8
1,494,755	-		Pf1N1B4_1311	0.11	-2.1
1,494,755	-		Pf1N1B4_1311	0.11	+0.2
1,495,303	+		Pf1N1B4_1311	0.56	+0.1
1,495,304	-		Pf1N1B4_1311	0.56	-1.3
1,495,426	-		Pf1N1B4_1311	0.66	-1.9
1,495,435	-		Pf1N1B4_1311	0.67	-0.9