Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_106

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
111,435	+		Pf1N1B4_104	0.81	+0.7
111,436	-		Pf1N1B4_104	0.82	-0.5
111,436	-		Pf1N1B4_104	0.82	+0.1
111,436	-		Pf1N1B4_104	0.82	-1.5
111,441	-		Pf1N1B4_104	0.82	-3.2
111,441	-		Pf1N1B4_104	0.82	-0.9
111,996	+		Pf1N1B4_105	0.48	-1.5
112,232	-		Pf1N1B4_105	0.83	-1.9
112,364	+				-0.1
112,364	+				+1.1
112,368	+				-1.7
112,368	+				+0.1
112,368	+				+1.2
112,369	-				+1.1
112,395	+		Pf1N1B4_106	0.17	+0.4
112,409	+		Pf1N1B4_106	0.22	+1.1
112,438	+		Pf1N1B4_106	0.32	+1.4
112,438	+				+1.1
112,438	+		Pf1N1B4_106	0.32	+1.7
112,444	+		Pf1N1B4_106	0.34	+1.6
112,668	+				+0.1
112,668	+				+1.1
112,668	+				-1.7
112,668	+				-0.9
112,668	+				-1.5
112,761	+		Pf1N1B4_107	0.30	-1.9
112,762	-		Pf1N1B4_107	0.31	+1.7
112,767	+		Pf1N1B4_107	0.32	-0.7
112,767	+		Pf1N1B4_107	0.32	+0.1
112,767	+		Pf1N1B4_107	0.32	+1.8
112,768	-		Pf1N1B4_107	0.33	-0.2
112,768	-		Pf1N1B4_107	0.33	-1.2
112,768	-		Pf1N1B4_107	0.33	-0.2
112,768	-		Pf1N1B4_107	0.33	+3.7
112,777	-				+1.1
112,864	+		Pf1N1B4_107	0.64	-1.1
112,865	-		Pf1N1B4_107	0.64	-1.9
112,988	+				+0.1
113,006	+				-0.9
113,006	+				-1.2
113,007	-				-0.9
113,007	-				-1.2
113,016	-				-0.5
113,016	-				-1.2
113,016	-				+0.7
113,020	+				+0.1
113,020	+				-0.7
113,035	-				-0.9
113,087	-				-1.5
113,126	+				-1.3
113,127	-				-0.5
113,128	+				-0.1
113,154	+				+1.4
113,154	+				+1.2
113,155	-				+0.1
113,510	+		Pf1N1B4_108	0.27	+1.1
113,510	+		Pf1N1B4_108	0.27	-0.5