Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_100

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
104,902	+		Pf1N1B4_99	0.38	-1.2
104,902	+		Pf1N1B4_99	0.38	+0.8
104,903	-		Pf1N1B4_99	0.38	-1.9
104,903	-				+2.7
105,020	-		Pf1N1B4_99	0.49	+2.1
105,192	+		Pf1N1B4_99	0.66	+0.0
105,192	+		Pf1N1B4_99	0.66	-0.5
105,255	+		Pf1N1B4_99	0.72	+0.2
105,268	+		Pf1N1B4_99	0.73	-1.4
105,268	+		Pf1N1B4_99	0.73	+0.2
105,269	-		Pf1N1B4_99	0.73	-0.2
105,301	+		Pf1N1B4_99	0.76	-1.9
105,301	+		Pf1N1B4_99	0.76	+2.3
105,301	+		Pf1N1B4_99	0.76	-1.9
105,301	+		Pf1N1B4_99	0.76	-1.2
105,301	+		Pf1N1B4_99	0.76	-0.5
105,302	-				-1.2
105,302	-		Pf1N1B4_99	0.76	-0.6
105,428	-				-0.5
105,657	+				+0.8
105,657	+				-1.1
105,657	+				-1.2
105,658	-				+0.2
105,791	-				+0.7
105,828	-				-0.5
105,828	-				+1.7
105,829	+				-0.3
105,830	-				-1.1
105,830	-				+2.1
105,833	+				-1.2
105,833	+				-0.5
105,833	+				-1.2
105,834	-				-0.9
105,834	-				+1.4
105,834	-				+1.1
105,834	-				-1.1
105,834	-				+1.0
105,834	-				+1.6
105,834	-				+1.2
105,834	-				-3.2
105,845	+				-0.3
105,846	-				-0.8
105,854	+				+0.6
105,885	+		Pf1N1B4_100	0.13	+1.5
105,885	+		Pf1N1B4_100	0.13	-1.2
105,885	+		Pf1N1B4_100	0.13	+1.1
105,886	-		Pf1N1B4_100	0.14	+1.6
106,226	+		Pf1N1B4_101	0.48	+1.5
106,226	+		Pf1N1B4_101	0.48	+0.1
106,227	-		Pf1N1B4_101	0.48	-0.1
106,293	+		Pf1N1B4_101	0.88	+0.3
106,424	+				+1.1
106,424	+				-0.9
106,424	+				-0.7
106,424	+				+0.6
106,428	-				+0.0
106,428	-				+0.3
106,501	+				+1.1
106,502	-				-2.6
106,549	+				-0.9
106,550	-				-0.9
106,677	+				+0.3