Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03492

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
3,650,720	+		CCNA_03490	0.55	+0.6
3,650,728	-		CCNA_03490	0.59	-1.2
3,650,791	+		CCNA_03490	0.87	+1.4
3,650,799	-				+0.2
3,650,912	-				-0.5
3,650,912	-				-0.2
3,650,915	+				+0.5
3,650,923	-				+0.6
3,651,033	-		CCNA_03491	0.21	-0.4
3,651,038	-		CCNA_03491	0.21	+1.1
3,651,038	-		CCNA_03491	0.21	-0.5
3,651,107	+		CCNA_03491	0.30	-0.3
3,651,115	-		CCNA_03491	0.31	-0.0
3,651,153	-		CCNA_03491	0.36	-1.5
3,651,153	-		CCNA_03491	0.36	+1.0
3,651,183	+		CCNA_03491	0.40	-0.2
3,651,222	+		CCNA_03491	0.45	+1.4
3,651,222	+		CCNA_03491	0.45	+0.5
3,651,230	-		CCNA_03491	0.46	-0.6
3,651,275	+		CCNA_03491	0.52	-1.5
3,651,275	+		CCNA_03491	0.52	-1.8
3,651,275	+		CCNA_03491	0.52	-2.2
3,651,285	-		CCNA_03491	0.53	+0.4
3,651,298	-		CCNA_03491	0.55	-0.5
3,651,300	+		CCNA_03491	0.55	+2.0
3,651,331	-		CCNA_03491	0.59	+0.6
3,651,375	+		CCNA_03491	0.64	-2.4
3,651,413	+		CCNA_03491	0.69	-1.0
3,651,417	+		CCNA_03491	0.70	+1.0
3,651,424	-		CCNA_03491	0.71	+0.7
3,651,440	-		CCNA_03491	0.73	-1.7
3,651,460	+		CCNA_03491	0.75	-0.2
3,651,512	+		CCNA_03491	0.82	-0.6
3,651,512	+		CCNA_03491	0.82	-0.5
3,651,523	+		CCNA_03491	0.83	-0.7
3,651,529	-		CCNA_03491	0.84	+1.7
3,651,564	-		CCNA_03491	0.89	+0.5
3,651,567	+		CCNA_03491	0.89	+0.4
3,651,568	+		CCNA_03491	0.89	-2.0
3,651,575	-				+0.4
3,651,576	-				-2.0
3,651,576	-				+2.8
3,651,576	-				+2.4
3,651,576	-				-0.9
3,651,641	-				-0.8
3,651,672	-				-1.2
3,651,724	-				+1.3
3,651,726	-				-0.1
3,651,733	+				-0.5
3,651,740	-				-0.6
3,651,748	-				+1.3
3,651,751	-				+0.1
3,651,793	+				-0.8
3,651,801	-		CCNA_03492	0.11	-1.7
3,651,801	-		CCNA_03492	0.11	-0.0
3,651,801	-		CCNA_03492	0.11	-1.4
3,651,801	-		CCNA_03492	0.11	-3.2
3,651,801	-		CCNA_03492	0.11	-1.4
3,651,809	+		CCNA_03492	0.12	-1.5
3,651,833	+		CCNA_03492	0.15	+1.8
3,651,844	-		CCNA_03492	0.16	-0.3
3,651,886	-		CCNA_03492	0.22	+0.1
3,651,886	-		CCNA_03492	0.22	-1.9
3,651,910	-		CCNA_03492	0.25	-3.0
3,651,937	+		CCNA_03492	0.29	+1.9
3,651,937	+		CCNA_03492	0.29	-0.4
3,651,961	+		CCNA_03492	0.32	-0.5
3,651,982	-		CCNA_03492	0.34	-0.2
3,652,015	-		CCNA_03492	0.39	-0.8
3,652,015	-		CCNA_03492	0.39	-1.4
3,652,015	-				+0.4
3,652,015	-		CCNA_03492	0.39	-2.2
3,652,015	-		CCNA_03492	0.39	-1.7
3,652,015	-		CCNA_03492	0.39	-1.2
3,652,044	+		CCNA_03492	0.42	-0.5
3,652,126	+		CCNA_03492	0.53	+0.8
3,652,134	-		CCNA_03492	0.54	-1.5
3,652,134	-		CCNA_03492	0.54	-1.4
3,652,179	+		CCNA_03492	0.60	+0.3
3,652,179	+		CCNA_03492	0.60	+0.6
3,652,187	-		CCNA_03492	0.61	-1.3
3,652,219	-		CCNA_03492	0.65	+1.4
3,652,223	+		CCNA_03492	0.66	+2.0
3,652,226	-		CCNA_03492	0.66	-0.9
3,652,244	-		CCNA_03492	0.68	-3.0
3,652,247	+		CCNA_03492	0.69	-1.7
3,652,252	+		CCNA_03492	0.70	+1.1
3,652,255	-		CCNA_03492	0.70	-0.7
3,652,265	+		CCNA_03492	0.71	-0.8
3,652,394	+		CCNA_03492	0.88	+0.6
3,652,394	+		CCNA_03492	0.88	+0.9
3,652,399	+		CCNA_03492	0.89	-1.0
3,652,402	-		CCNA_03492	0.89	-0.6
3,652,402	-		CCNA_03492	0.89	+0.1
3,652,433	-				-2.5
3,652,434	+				-0.6
3,652,480	+				+1.1
3,652,481	+				-0.4
3,652,495	+				-1.2
3,652,526	+				-1.3
3,652,560	+				+1.3
3,652,569	-				-1.0
3,652,588	-				-0.5
3,652,616	-				-2.4
3,652,616	-				-1.0
3,652,623	-				-1.2
3,652,662	-				+0.4
3,652,670	-				+0.7
3,652,670	-				-2.4
3,652,675	+				+0.1
3,652,675	+				+0.3
3,652,683	-				-2.0
3,652,683	-				-0.6
3,652,687	+				+0.5
3,652,687	+				+0.1
3,652,687	+				-1.1
3,652,687	+				+1.2
3,652,687	+				-1.5
3,652,687	+				+2.2
3,652,687	+				+0.1
3,652,693	+				+0.3
3,652,693	+				+2.5
3,652,693	+				+0.4
3,652,694	+				+3.1
3,652,695	-				+0.5
3,652,695	-				-0.6
3,652,695	-				+2.0
3,652,695	-				-1.3
3,652,703	-				-2.6
3,652,715	+				+0.9
3,652,882	+		CCNA_03493	0.45	-1.3
3,652,935	-		CCNA_03493	0.57	+1.4
3,652,973	+		CCNA_03493	0.66	+2.0
3,652,990	+		CCNA_03493	0.70	+0.7
3,652,998	-		CCNA_03493	0.72	-2.2
3,653,031	-		CCNA_03493	0.79	-0.0
3,653,038	-		CCNA_03493	0.81	+1.9
3,653,115	+				-0.0
3,653,115	+				+2.6
3,653,115	+				-0.7
3,653,120	+				-0.6
3,653,120	+				-0.3
3,653,123	-				+0.7
3,653,123	-				-2.0
3,653,128	-				+0.8
3,653,135	-				+1.7
3,653,153	-				-0.3
3,653,163	+				+1.8
3,653,163	+				+1.7
3,653,163	-				+0.9
3,653,163	-				-1.7
3,653,171	-				-0.3
3,653,194	+				+1.4
3,653,194	+				+0.7
3,653,194	+				-0.4
3,653,202	-				-3.3
3,653,202	-				-0.4
3,653,202	-				-0.3
3,653,225	-				-0.3
3,653,244	+		CCNA_03494	0.11	-1.0
3,653,254	+		CCNA_03494	0.12	-2.0
3,653,262	-		CCNA_03494	0.12	+0.4
3,653,321	-		CCNA_03494	0.18	-1.9
3,653,373	+		CCNA_03494	0.23	-0.6
3,653,407	-		CCNA_03494	0.26	+0.4